Gene Acid345_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3603 
Symbol 
ID4072825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4263977 
End bp4264318 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content62% 
IMG OID637985626 
ProductPadR family transcriptional regulator 
Protein accessionYP_592678 
Protein GI94970630 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0899906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACC AGGCGCAACT GCTTCCCGGC ACACTCGATT TGCTGATCTT GAAAGCAGTC 
TCACTCGGGC CTCTGCACGG CTACGGAGTA CTGCTGCGCA TTGCGCAAAT CACCGCCGAT
GCGTTGCTGG TGGAGCAGGG TGCGCTCTAT CCCGCGCTCT TCCGCCTGGT GCGCCAGGGA
TTGCTGAAGT CGACTTGGGG CACTTCGGAA AACAATCGTA AGGCGAAGTT TTATGAGCTC
ACTGCCGGCG GCCGCAAGCG GCTGGTGGAA GAGACGAGCG ACTGGAAGAA GCTGGCGGCG
GCGATGTCGG CTGCGCTGGC AGCGCGTCCG GAGGAAGTAT GA
 
Protein sequence
MGDQAQLLPG TLDLLILKAV SLGPLHGYGV LLRIAQITAD ALLVEQGALY PALFRLVRQG 
LLKSTWGTSE NNRKAKFYEL TAGGRKRLVE ETSDWKKLAA AMSAALAARP EEV