| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3602 |
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| Symbol | |
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| ID | 4072824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4262219 |
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| End bp | 4263889 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637985625 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_592677 |
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| Protein GI | 94970629 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0222501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGG GCTTCGTCGC CCTGCTGTTT GCCCCGACCT TGCGGTACGG CTTCGTCTAC
GACGACCGCG TGGTGATTCT CGAGAACCCG TACATCCAGT CGTGGCGATG GTTCCTGCAC
GATTTCACCT CCCACGTTTG GGCCCAAGTC TCGAGCCAGC CCGCCAGTTA CTATCGTCCG
GTTTTCATAA CCTGGCTGCG CCTGAACCAC ACCCTCTTCG GTTTCCAGCC GTGGGGATGG
CACCTGACCA CGGTACTGGC GCACGTGGTG GCAACGCTGC TCGTCTATCG CTTGGCGTTG
CGGCTTTTGC GAAGCCCCTG GCAGGCGGCG ATTGCGGCTT TAATCTTCGC GGTTCATCCA
GTCCACGTGG AAAACGTCGC ATGGGTCTGC GGATCGGTGG ATCCGCTCAT GTCGATTTTC
TATCTCGGCG CGATATTGAG CTATTTGCGT TGGCGCGAAC AGCATTCGCC GGTTGCGCTC
GCCGTCTCGG TGCTGCTGGC GCTGACAGCT ACGCTTACGA AGGAGATCGC GATCACACTG
CCCGCGGTGA TCTTCGCATA CGCAGCGCTC TTTAGCCCCG CCGAAGCTGG TTGGGGCAAG
CGGTTTCTCG CGGCTGCGAG AGATACCGTG CCCTTCGTGC TTGTCGCTGC CGCCTACATG
GCCGCGCGCA GTGTGGTGTT GCATGGGCCA ATATTCGCGG AGATATCGCT GGCAACCGTG
CTGCTCACAC TGCCGGGACT TCTGCTCTTC TATGCGCGGC TGACGGTCTG GCCGGTGAAT
TTGAGTCTCT TCTACAACCG CGCGCCGGTG CAGAGTTTCA GCGCGCAGCG CGTACTGCTT
CCGCTGCTGG TTCTGGCGCT GATCGCGGCG GGTCTGTTCA TGTGGCTGCG GAGAAGTAAA
CAGCGACGTG AAGGCCTGTT CGCGCTTGTT CTGGCGCTGC TGGCGCTGTC GCCGCCTCTG
TATATCCGCT TGTTCAATCC GGACGACTTC GTGCACGACC GCTATTTGTA CCTGTCGATG
GCGGGTGTCG CGATGCTTGC GGCGATGGCT ATAACTTCAA TCAGGGGCGT CAAAGATGGA
AAGTCGTTCG CGCCGCTCCC GCAGGTGCTG GTAGTAGCGG CCATCACGCT TGCCCTGAGC
CTCGGAACGA CAATGACGAA CGGCAACTGG CGCGATGATC TTTCGCTCTG GGGGCATTGC
TTCAAGGTAG CTCCGCACAA CGTGCGCGTA CTGAACAACC TCGCCTCGTC GCTCGGGGAG
TCGGGCGCCT ACCAGGTCGC GGTGCCAATG TTCCTCGAAG TACTGAAACG CGATCCGAGC
AATGCTCGCG CTAACGCGAA CCTTGGCTAT ACGCTCTACC AGGCAGGCGC GCTGGAGCAG
GCGGAGAAGT ATCTCTCGAA AGCAGTGCTG TTGAACGCCT CCGATGCCCA TTCCTGGCTA
TATCTTGGCG TGACTCACCT CAAGCTAGGC GCGACTGCGG AAGCGGAGTC GGACCTGCGC
CAGGCGATAA CGATAGACCC CTCGGCCACC GGCGCGCACT TGGCTTTATC AGTGGTGCTC
GAACAGCGCG GTGACCGGGC GGGCGCCATC GCCGAATCGC AAGAAGAGCT GCGCTATCAC
CCCGAGGAAC AATCGGTGCA GCAGCGCCTC CAACAACTGC AGGCGAAATA A
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| Protein sequence | MLAGFVALLF APTLRYGFVY DDRVVILENP YIQSWRWFLH DFTSHVWAQV SSQPASYYRP
VFITWLRLNH TLFGFQPWGW HLTTVLAHVV ATLLVYRLAL RLLRSPWQAA IAALIFAVHP
VHVENVAWVC GSVDPLMSIF YLGAILSYLR WREQHSPVAL AVSVLLALTA TLTKEIAITL
PAVIFAYAAL FSPAEAGWGK RFLAAARDTV PFVLVAAAYM AARSVVLHGP IFAEISLATV
LLTLPGLLLF YARLTVWPVN LSLFYNRAPV QSFSAQRVLL PLLVLALIAA GLFMWLRRSK
QRREGLFALV LALLALSPPL YIRLFNPDDF VHDRYLYLSM AGVAMLAAMA ITSIRGVKDG
KSFAPLPQVL VVAAITLALS LGTTMTNGNW RDDLSLWGHC FKVAPHNVRV LNNLASSLGE
SGAYQVAVPM FLEVLKRDPS NARANANLGY TLYQAGALEQ AEKYLSKAVL LNASDAHSWL
YLGVTHLKLG ATAEAESDLR QAITIDPSAT GAHLALSVVL EQRGDRAGAI AESQEELRYH
PEEQSVQQRL QQLQAK
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