Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3440 |
Symbol | |
ID | 4070324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4058869 |
End bp | 4060152 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985462 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_592515 |
Protein GI | 94970467 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACCAT CGCTGCCGTC GCGGCCTCCG GGCTTCGTCT ACAAATCCAA CAAGCTGCAC GTGGAGAAGA TCGCCGCATC GGATCTGGCG CGCAGGTTCG GCACGCCGCT CTACACTTAC TCCGCGACGA CGATCCGCGA GCGTTTCGAC ATCTTCAACC GTGCCTTCGG CAAGGTGCCG CACACAATCT GCTATTCGGT GAAGGCGAAC TCGAACCTCA CCATCCTCAA AATGCTGGTG AAGCTCGGCT CCGGCTTCGA TGTCGTCTCC GGTGGCGAAC TTGAGCGAGT ACTGGTGGTC GACAAGAAAG CGGCGAAGAA GGTCGTCTTC TCCGGGGTTG GCAAGACCGC GCCCGAGATG GACCTGGCGA TCAAGTCGGA CATTCTGCTG TTCAATATCG AGAGCGAATC TGAGCTGGAG TTGCTCGCCT CGCGGGCGTC AAAGCTGCGG AAAAAGCCGC GCATCGCGTT CCGCGTGAAT CCCGACGTCC CGGCAGAAAC GCATCCGTAT ATTTCCACGG GGCTGCGCGA GCACAAGTTC GGTGTACCGA TCACAGACGC TGCCCTGCTC TATGCGCAGG CGGCATCGAC AGAGTGGCTG GAGCCTGCCG GCGTCAGCGT GCACATTGGT TCGCAAATCA CAGACGTCGC GCCATTCAAC GCCACCATGG AACGCGTGGC CGATCTCGTC CGCGGGTTGC GCGCCCAGGG CCACAATATT CGTCTCATCG ACGGCGGCGG TGGCCTCGGG ATCGCCTACC GCGATGGTGA CACCAGCCTC AAGGCCTTCG AGGCTTCCGC GAAAAACTAC AGCGCGGCTC TCTTGCCGCC GCTCAACAGC CTTGGCATTC ATCTTTTGCT GGAACCGGGT CGCGCGATCA TTGGTCCTGC CGGTGCACTG CTCACCCGGG TGGTCTATTC GAAGAAGAAC GGTCGCAAGA CATTCGTAAT CGTGGATGCG GGCATGAACG ACCTGATCCG GCCCGCGCTC TACGGCGCTT ACCATGAGAT TGTCGCCGCC GAGCCGCGCG GCACTGGCGC GGAAACGGTG GACGTGGTCG GTCCCGTCTG TGAAACCGGC GATTTCTTCG CCCGCGATCG CGAGCTTACG CACCTTGAAG AAGGCGATCT CGTCGCCATC CTCGACGCCG GTGCCTATGG CATGTCGCAG ACTTCGAACT ACAACACGCG ACCCAGACCA GCCGAGGTTT TGGTCGAAGG ATCGCGCGCA AAAGTCGTGC GACGACGTGA AACCATCAAG GACCTGCTGG GCCCCGAGCG GTAG
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Protein sequence | MKPSLPSRPP GFVYKSNKLH VEKIAASDLA RRFGTPLYTY SATTIRERFD IFNRAFGKVP HTICYSVKAN SNLTILKMLV KLGSGFDVVS GGELERVLVV DKKAAKKVVF SGVGKTAPEM DLAIKSDILL FNIESESELE LLASRASKLR KKPRIAFRVN PDVPAETHPY ISTGLREHKF GVPITDAALL YAQAASTEWL EPAGVSVHIG SQITDVAPFN ATMERVADLV RGLRAQGHNI RLIDGGGGLG IAYRDGDTSL KAFEASAKNY SAALLPPLNS LGIHLLLEPG RAIIGPAGAL LTRVVYSKKN GRKTFVIVDA GMNDLIRPAL YGAYHEIVAA EPRGTGAETV DVVGPVCETG DFFARDRELT HLEEGDLVAI LDAGAYGMSQ TSNYNTRPRP AEVLVEGSRA KVVRRRETIK DLLGPER
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