Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3246 |
Symbol | |
ID | 4072581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3843696 |
End bp | 3846341 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985267 |
Product | Beta-glucosidase |
Protein accession | YP_592321 |
Protein GI | 94970273 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.190497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.145992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTC GTGCATTCCC TATTTGCCTG CTGTTGCTGG CCTTCCTTGT CCCTCTGACC ACGGCGCAGA ATGCTGAACA GCCTGCGTAT CTAAACCCTT CCCTGGCGCC GGAAAAGCGA GCGGCAGACC TCGTCCATCG CATGACCGTG GAAGAGAAGG TCAGCCAACT CACCAACGAT TCGCGTGCCG TTCCTCGTTT GAATGTTCCT GACTACGACT GGTGGAGTGA AGCGCTCCAC GGCGTGGCGC AACCGGGCGT CACCGAATAT CCGCAGCCCG TGGCGCTGGC AGCCACCTTC GACAACGATA AGGTCCAGCG CATGGCCCGC TTTATCGGCA TCGAGGGCCG CATCAAGCAC GAAGAAGGCA TGAAGGACGG CCATAGCGAT ATCTTCCAGG GCCTCGATTT CTGGGCGCCG AACATCAACA TCTTTCGCGA CCCTCGCTGG GGACGCGGCC AGGAGACCTA CGGCGAAGAT CCGTTCCTGA CCGCGCGCAT GGGCGTGGCT TACGTGAAGG GCCTGCAAGG CGACGACCCC AAGTACTACC TCGCCATCTC TACGCCCAAG CATTACGCGG TGCACAGCGG CCCTGAGACC ACGCGCCACT TCGCGGACGT GAAGGTCAGC AAGCACGACG AGCTCGATAC CTATCTGCCC GCCTTCCGCG CCACCGTCAC CGAAGCCAAG GCCGGCTCCG TCATGTGTGC CTACAACAGC ATCAACGGAC AGCCTGCTTG CGTGAACGAA TTCCTGCTGC AAGACCAGTT GCGCGGCAAG TGGAACTTCC AGGGCTATGT CGTCTCCGAT TGCGAGGCGA TCATCAACAT CTATCGCGAC CACAAGTTCA CCAAGACTCA GGCGGAAGCC TCCGCGCTCG CGGTACAGCG CGGCATGGAC AACGAATGCG TCGACTTCGG CAAGCAAAAG GACGATCACG ATTACCGTCC CTACTTCGAC GCCTACAAGC AGGGCATCTT GAAAGAGAGT GAGATCGATA CCGCGCTCGT TCGCCTCTTC ACCGCCCGCA TGAAGCTTGG CATGTTCGAT CCGCCGGAAA TGGTCCCCTA TTCCAAAATC GATCCCAAGG AATTGGAGAG CGCCGAGCAT CGCGAGTTGG CACGAACCCT GGCGAACGAA TCCATGGTGC TTCTGAAGAA CGATGGCACG CTGCCGCTGA AGAAGTCGGG GCTGAAGATA GCGGTGATCG GCCCATTGGC GGAACAGACG CGCTATCTCC TCGGCAATTA CAACGGCACA CCGTCACACA CCGTCTCCGT GCTCGAAGGT CTCAGGGCGG AGTTCCCCGA CGCGCAGATC ACCTTCGAAC GTGGCACCCA ATTCCTCGAT CAGAACGGCG AAGCGGTTCC CTCCAGGGCG TTGACTACCG AGGACGGAAA GCCTGGCTTG AAAGCGGACT TCTCCACCGG TGAGTTCTTT GGCGACAAGA TTCCGCTCAC GTCCGCGCAG GCGAGCAATG TTGATTTCAC CAACAAAGAC ATCCCGCAGG CTGCCGCTGG AAAGTTCCCG CTCAACGTGG AATGGAGTGG CTTCCTCACC GCCAGTGAGA CCGGGCGGTA CAGCCTCGGC GTGCGTGCGC TAGGAAACGC CGCCATCGTC GAAGTAGATG GCAAGCCCCT CGCCAGGGAG TGGCTCGACG GACAGCACGT GCAAACCGCG GTCGGCCACA TTCATCTCGA GCAAGGCAAG AAGATCGCCA TCAAGGTGCG CTACTCCATC CGGCAAGCCG GCCCCATGCA GGCGCAATTG ATCTGGTCGA AGTTCGATCC GACGCCGAAT CCCGCAGCTG TGACGGCAGC CAAGAATGCC GATGTCGTCA TCGCTGTGCT CGGCATCACC AGCGACCTGG AAGGCGAAGA GATGCCTGTC AGCGAGGAAG GCTTCAACGG CGGCGATCGG ACCAGCCTCG ACCTTCCAAA ACCGGAGCAG CAACTGCTCG AGTCCATTTC GGCCGCGGGC AAGCCGGTGG TCCTCGTGCT GTCGAACGGC AGCGCGCTGT CGGTGAATTG GGCGCAGCAA CACGCCAACG CGATTCTCGA AGGCTGGTAT CCCGGCGAAG AAGGCGGGAC CGCCATTGCC CAAACGCTCT CCGGCAAAAA CAACCCGGCA GGACGCCTCC CGGTCACGTT CTACACCGGC ACTGAGCAAC TGCCGCCCTT CGAAGATTAC GCGATGAAAG GACGCACCTA TCGCTACTTC GAAGGCAAGC CGCTCTACCC GTTCGGATAT GGCCTGAGCT ACACCACGTT CTCTTATCGC GACCTCGCGC TTCCCAAGGC TCCGTTGAAC GCAGGCGACC CGGTGACAGC GCAAGTCACA GTCACCAACA CCGGAAAAGT GGAAGGCGAT GAAGTGGCGC AGCTCTACCT CTCGTTCCCA AACATCGCGG GAGCACCGCT GCGCGCACTG CGCGGATTCC GGCGTATTCA CCTCAAGGCG GGCGAATCGC AGACGATAAA GTTCGAACTG AAGGACCGGG ACTTGAGCAT GGTCAATGAA GCGGGCGATC CCATCATCGC GGAGGGCGAG TACTCCGTCT CGGTAGGTGG CGGCCAACCG GACACCGGCG CACCGACGGT CTCTGGAAAA TTCCAGATAC AGGGGACGAA GAAGCTGCCG GAATAA
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Protein sequence | MRIRAFPICL LLLAFLVPLT TAQNAEQPAY LNPSLAPEKR AADLVHRMTV EEKVSQLTND SRAVPRLNVP DYDWWSEALH GVAQPGVTEY PQPVALAATF DNDKVQRMAR FIGIEGRIKH EEGMKDGHSD IFQGLDFWAP NINIFRDPRW GRGQETYGED PFLTARMGVA YVKGLQGDDP KYYLAISTPK HYAVHSGPET TRHFADVKVS KHDELDTYLP AFRATVTEAK AGSVMCAYNS INGQPACVNE FLLQDQLRGK WNFQGYVVSD CEAIINIYRD HKFTKTQAEA SALAVQRGMD NECVDFGKQK DDHDYRPYFD AYKQGILKES EIDTALVRLF TARMKLGMFD PPEMVPYSKI DPKELESAEH RELARTLANE SMVLLKNDGT LPLKKSGLKI AVIGPLAEQT RYLLGNYNGT PSHTVSVLEG LRAEFPDAQI TFERGTQFLD QNGEAVPSRA LTTEDGKPGL KADFSTGEFF GDKIPLTSAQ ASNVDFTNKD IPQAAAGKFP LNVEWSGFLT ASETGRYSLG VRALGNAAIV EVDGKPLARE WLDGQHVQTA VGHIHLEQGK KIAIKVRYSI RQAGPMQAQL IWSKFDPTPN PAAVTAAKNA DVVIAVLGIT SDLEGEEMPV SEEGFNGGDR TSLDLPKPEQ QLLESISAAG KPVVLVLSNG SALSVNWAQQ HANAILEGWY PGEEGGTAIA QTLSGKNNPA GRLPVTFYTG TEQLPPFEDY AMKGRTYRYF EGKPLYPFGY GLSYTTFSYR DLALPKAPLN AGDPVTAQVT VTNTGKVEGD EVAQLYLSFP NIAGAPLRAL RGFRRIHLKA GESQTIKFEL KDRDLSMVNE AGDPIIAEGE YSVSVGGGQP DTGAPTVSGK FQIQGTKKLP E
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