Gene Acid345_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2816 
Symbol 
ID4071819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3340513 
End bp3341673 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID637984834 
ProductNHL repeat-containing protein 
Protein accessionYP_591891 
Protein GI94969843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.306413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGCG CGGAGAATGT TTCGCAGCAG AACGGCCTGC AACTCGCGGA TGCTCCTCGG 
TCTTTGTTTC CACTTGTCGC GCGTGGCGGT GGCAGCGAGA TTCGGTACAT TGGCGCCATC
TTCGCCGATG GAAAGTTTCG TGTGGGAGCG TTTGCAAGCG CGAACGCTCA GGAGCACGCG
AACTTGTACG ACGGGACGAC TCCCCTTTCG CGGCCTGCAG ACGTTCCCCC GGCCGTCGAA
CTTCACCCGC GCGAGCAGGC TCGGGAGAAC CTTTCTGCAA AGAACACGGC GCAGAAATCA
GCTGCAGGGC GATCGGAAAT TGTTGGGTTG CTTGACGAGG TTGTGACCGC GGTTTACGGC
CGCGAGCAGA GCCTGATGGG GCCTACGTCT GTAACCACGG ACCGCGACGG ACGCGTGATC
GTCTCTGATC CGGCTGCGCT ATCGGTACAT GTGTTCGATC CGATGCGACC TTTCCGCATC
CTGGCTGGGA CGCAATACCG ACTCCAACAT ATCGGCCCAG TTGCCACGGA TGCGGTGCGA
AACATCTATG TCGCAGATCC GGTGCAGGGC GTGGTGGTGG AATTTGATCG CGAGGGCAGG
TATCTCGGCG AGATCGGGAG GCTCGGCGAG GGTGAAGGCA TCTTTCACGA GCCAGTCGCA
ATGGCGGTTG ATGTTCACCA TTTCTTGTAC GTTGCGGATG CAGAGCGCGA CATGGTTCTG
ATGGTGAACA GCGAGGGTAA AATCCTGCGA CGTGCGGGCG GACGGCGCAA AGAGCTGGGC
GTGAGTCTCG AACATCCGAG CGCGCTGGTG CTGAAGCATG ACCAGTTGTT CGTACTGGAC
GCGAATGACA CGCGCGTGCA GGTGTTCGAT TCGCAGCTTC GACGGCGCAT GACATTTGAT
ACCGGGTTAG GACCAGGGCA CAGAACACTG GATCTAGACA CTGCCGGAAA TATCTATGTG
AGCGATGGGC GCACGATTTA CATATTTGAC GGAGAGGGAC ACCGGAAGGG CGAGTTTGGC
CGGAAGGGCA GTCTTCGCGG GGAAATTAGC AGTGTAGCGG GGCTGTGGAT CGACGAGAAC
GATCGCATGT ATGTGACGGA TAAAGAGAAT CGGCGCGTGG CGGTGTTTCA GATCAAGATG
TTGGAAGACA CGGCACATTG A
 
Protein sequence
MIGAENVSQQ NGLQLADAPR SLFPLVARGG GSEIRYIGAI FADGKFRVGA FASANAQEHA 
NLYDGTTPLS RPADVPPAVE LHPREQAREN LSAKNTAQKS AAGRSEIVGL LDEVVTAVYG
REQSLMGPTS VTTDRDGRVI VSDPAALSVH VFDPMRPFRI LAGTQYRLQH IGPVATDAVR
NIYVADPVQG VVVEFDREGR YLGEIGRLGE GEGIFHEPVA MAVDVHHFLY VADAERDMVL
MVNSEGKILR RAGGRRKELG VSLEHPSALV LKHDQLFVLD ANDTRVQVFD SQLRRRMTFD
TGLGPGHRTL DLDTAGNIYV SDGRTIYIFD GEGHRKGEFG RKGSLRGEIS SVAGLWIDEN
DRMYVTDKEN RRVAVFQIKM LEDTAH