Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2622 |
Symbol | |
ID | 4072031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3093177 |
End bp | 3093959 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984639 |
Product | diaminopimelate epimerase |
Protein accession | YP_591697 |
Protein GI | 94969649 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.562727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCGA TTCCGTTTGC CAAGGCGAGC GCCTGCGGCA ACGATTTCCT TGTCATTGAT TTTGCGCATG CAGGTGACAA TCCCTCCGAA CTTTCGCGGC GGCTTTGCGA TCGCCATAAC GGCGTTGGCG CAGACGGCGT GGAGTGGATC CTGCCGACAT CGGAAGCCGA CATCGAAGCG CGCCTTATTA ACGCCGATGG CAGCGAAGCC GAGGTCTCAG GAAACGGCAC ACGGTGCGTG GCTGCCTGCA TCTCCGACCA CACCGGCGCA ACGAAGATTC GCATTCTGAC CGGCGCAGGA GTGAAGGCCT GCGAACTGAC CGTACACAAC GGCACGTCGT TTGAGTTCAA AGCCGCGATG GGGAAGCCCG AGATTGCTGG CGAACTAACA GTGAAGACCC GGCACCATGA AACGACTGGA ATCCAGCTCT CCACCGGCAA TCCGCACTTC GTCATCTTCG TCGAAGAGTT CGAGGAAGGC TGGCAAGTTC TCGCCGATTC GGTCGCGCGA ACGCCGCATT TTCCCTTGGG AACGAACATT GAATTCGTAA AGGTACTCGA TCGACATTCG CTGGATGTCC GGCTCTACGA GCGCGGTGTA GGCGAGACGC AATCCTCCGG CACCGGTTCT TGTGCGTCGG CCGTCGCCGC GATTCACTCC GGTAAATGCG AGTCTCCGGT GCGCGTCGCC ACGCCGGGCG GTGCGCAAAC CGTGGAGTGG AGCGGTGAAA TTACGCTCAC TGGGCCTGCG ACGATCGTCT GCACTGGCGA GTTTTTCATT TAA
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Protein sequence | MPSIPFAKAS ACGNDFLVID FAHAGDNPSE LSRRLCDRHN GVGADGVEWI LPTSEADIEA RLINADGSEA EVSGNGTRCV AACISDHTGA TKIRILTGAG VKACELTVHN GTSFEFKAAM GKPEIAGELT VKTRHHETTG IQLSTGNPHF VIFVEEFEEG WQVLADSVAR TPHFPLGTNI EFVKVLDRHS LDVRLYERGV GETQSSGTGS CASAVAAIHS GKCESPVRVA TPGGAQTVEW SGEITLTGPA TIVCTGEFFI
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