| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2435 |
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| Symbol | |
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| ID | 4072869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2875494 |
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| End bp | 2877488 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637984451 |
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| Product | oligopeptide transporter, OPT |
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| Protein accession | YP_591510 |
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| Protein GI | 94969462 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.498464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGC CGCAAACCAC CCTCCCCACC AGCGCCTACC AAACGCTGAA ACCCGGCGAG
AAATATCCGC CCATCATCTC GCCGTCGCAG AACATTCCCG AACTCACACC GCGTTCGGTG
ATCTGGGGCA TCGCGCTCTG CGTGCTTTTC ACCGTCGCAT CAGCGTATTC GGGATTGAAG
GTGGGGCAGG TGATGGAGTC GGCAATCCCG ATCTCGATCC TCGCTATAGG CCTTGCGCGC
GCCTACAGCC GGCGTTCCAC CATCCTCGAG AACGTGATCA TGACCGGCAT TGGCGGCGTC
GCCGGATCGG TCGTCGCGGG CGCGATCTTC ACCTTGCCGG CGCTCTACAT CCTGAAGCTT
GATCCACATC CGATGCAAAC GGTCTTCATC TGCCTCGCCG GCGGATGCAT GGGCGTGCTC
TTCGTCATAC CGCTGCGGCG CTACTTCGTC CGCGATATGC ACGGACTGCT TCCCTACCCT
GAAGCGACGG CCATTACCGA GGTGCTCGTC ACCGGCGAAA AGGGTGGTTC GCAGGCGCGG
CTGCTGCTGG AAGCTACGGC AATCTCCGGT GTGTATGACT TCTTCGTGAC GACCTTCAGC
GTGTGGAAGG AATACGTCAA CTTCCAGTTC GTGCCGATTA TGCAAAAGCT GAATGACAAA
GCCCGCATGG TCGTCAGCTT CGATGCCATC AGCTTCATCC TCGGCCTCGG CTACGTAATC
GGCCTGCGCA GCTCGATGAT CCTGTGCGCT GGAGGCATGC TCTCGAACCT CGTGCTGGTG
CCGTTGATCT GGTACGTGGG GAGCCATCTT GATTCTGCCG TCTATCCGGC ACTGATTCCG
ATTTCCAAGA TGACCGCAGT TCAGATCTAT CGCAACTACG TGCGTTTCAT CGGCGTCGGG
ACCATCGCGA CGGCGGGCAT TTTCGGCATC ATCAAGTCGC TACGGATTGT CGCTAGTTCA
TTCGGCATCG CGCTCAAGGT CTTCCAGCGC TCGGAGTCCG TGGCACAACC GGAGCGCACC
GACCGTGATA TCTCCATGGT GACAATCGTT CTCGGCATCG TCGCCAGCGG CATCGGCGTG
GCCGTGTTCA TGGGCTTCCT GAAGCCATCG TGGCTGGTGG TGATGATCGG CATGCTGCTG
ACGGTCGTCT TCTCGTTCTT CTTTACGTCC GTCGCGGCGA ATGCCATCGC GACCACGGCA
CGCAATCCCG TCAGCGGCAT GACGATGTTG ACGATCATCA TTTCGTCGGC AGTGCTGTTG
CAATTCGGGC TCTCAGGTAC CATCGGCATG TTCTTCGTGA TGGCGATTGC CGGCATGGTT
TGCACCGCTT TATCGGTCAG CGGCCAGGCC ATTACTGACT TCAAGGCCGG CTACTGGATC
GGCTCGACCC CGTCGGCGCA GGAGAAGGTG AAGTTCTTTG GCGTGATCGC CGCTGCGATC
GCGGCATCGC TAACTATCGT CATGCTGGCG CGTGGCTTCC AGTTCGGCGA AGCTGCGCTT
GGCGATCTGC GGCCAGTACT GCCGTCACCG CAGGCTTCCA TCATGAAGGC ACTGGTCGAA
GGATTGATGA GCCATCAACC GGTGGCGTAT ATGCTCTTCG GCGTAGGTGC GGTGATCGCC
GTTATCCTCG AGATGCTGGG CATGCCGTCG CTACTCTTCG CGCTCGGCAT GTATTTGCCA
CTGGAACTGA ACACACCCGC GCTGGTGGGC GGCATGATTT CGCACTTCGT GAATAAGCGT
GCCGAAAAGA CCGGCGGCGA TGCCGGCCGC AGCGTGCGCG AGCGTGGCGT TATCATCGCC
TCAGGACTGA TGGCGGGCGG TGCCCTCGGG GGCGTGCTCG GCGCGGCCTT GCGACTGCTG
CCCAAATATC GTGAAGATTT GATTCACACC CCGTTCTTCA ACAACGAGCC GGTGTCGCAA
ACGGTCTCGG CGGTGCTGTT CATCGGCCTC TGTCTTTATA TGTGGTTCCG GTCACTCAGG
AAGGAAGCGG AATAA
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| Protein sequence | MAAPQTTLPT SAYQTLKPGE KYPPIISPSQ NIPELTPRSV IWGIALCVLF TVASAYSGLK
VGQVMESAIP ISILAIGLAR AYSRRSTILE NVIMTGIGGV AGSVVAGAIF TLPALYILKL
DPHPMQTVFI CLAGGCMGVL FVIPLRRYFV RDMHGLLPYP EATAITEVLV TGEKGGSQAR
LLLEATAISG VYDFFVTTFS VWKEYVNFQF VPIMQKLNDK ARMVVSFDAI SFILGLGYVI
GLRSSMILCA GGMLSNLVLV PLIWYVGSHL DSAVYPALIP ISKMTAVQIY RNYVRFIGVG
TIATAGIFGI IKSLRIVASS FGIALKVFQR SESVAQPERT DRDISMVTIV LGIVASGIGV
AVFMGFLKPS WLVVMIGMLL TVVFSFFFTS VAANAIATTA RNPVSGMTML TIIISSAVLL
QFGLSGTIGM FFVMAIAGMV CTALSVSGQA ITDFKAGYWI GSTPSAQEKV KFFGVIAAAI
AASLTIVMLA RGFQFGEAAL GDLRPVLPSP QASIMKALVE GLMSHQPVAY MLFGVGAVIA
VILEMLGMPS LLFALGMYLP LELNTPALVG GMISHFVNKR AEKTGGDAGR SVRERGVIIA
SGLMAGGALG GVLGAALRLL PKYREDLIHT PFFNNEPVSQ TVSAVLFIGL CLYMWFRSLR
KEAE
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