| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2348 |
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| Symbol | |
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| ID | 4069160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2780071 |
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| End bp | 2780730 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637984364 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_591423 |
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| Protein GI | 94969375 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.524488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAA CCATGGTAAA GAAGCCTCAT ATCCGGATTG CAGTTGTTGA GAGCGACCCC
CTGCGCTTTG TTGGATTTCG CGCGTTGTTC GATGCCGAAT CAGATCTCGA ACTGATGTCG
GCGACTGTTG CTGAACTTGC TAATCGTAAG GACGTGGATC TTGTCCTGCT CGGCAGCAGA
AACGGCCAGA ATCTCTTCGA CGTGATGGCC AGCCTCAAGG CTGCCCGTCC CGATCTCCGT
ATTATCGTCA CCGGCACCGG AGCCGACGAC GAAACCATCT TGAAAGCCGT GGCCGCGGGC
GCTAAAGGCT ACGTGGACGA GGCCGCTTCG CCGGCCGAAT TCGTCCAGGC CATCCGCATC
GTCAATCAGG GCAGTGTATG GGCTCCGCGC CGCGTGCTCT CCATATTCAT CGAACGCGTC
ACCTCCTCGC CGGGCCGCAT CTTCCCGGCA GGTCGCGTTA CGTTTACCGA TCGTGAGAAA
GAAGTGCTGG AACTCCTCGT TGCAGGCAGG TCGAACAAGG AAATCGGCTC GGCTCTCGGC
ATCGAAGAAC GCACCGTAAA AGCGCACGTC GCCAAGCTCA TGCGCAAGGT CGGCGTCCAG
AATCGCATCG CGCTTTCCGT CCACGCCATC ACCCATTCAC TCGTCACCTC ATCTCGATAA
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| Protein sequence | MKATMVKKPH IRIAVVESDP LRFVGFRALF DAESDLELMS ATVAELANRK DVDLVLLGSR
NGQNLFDVMA SLKAARPDLR IIVTGTGADD ETILKAVAAG AKGYVDEAAS PAEFVQAIRI
VNQGSVWAPR RVLSIFIERV TSSPGRIFPA GRVTFTDREK EVLELLVAGR SNKEIGSALG
IEERTVKAHV AKLMRKVGVQ NRIALSVHAI THSLVTSSR
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