Gene Acid345_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1999 
Symbol 
ID4070905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2396614 
End bp2397009 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content55% 
IMG OID637984013 
Productgeneral secretion pathway protein G 
Protein accessionYP_591074 
Protein GI94969026 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.607295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATGA GACGACGACA ACGCGGATTC ACCCTGATCG AGTTGATGAT CGTGATGAGC 
ATCATCGTCA TCCTGCTCGG GATTGCCATT CCCAACTACC GGAATTCGAT CATCCGCGCA
CGTGAGAGCG TTCTGAAGGA TGACTTGTTC ACGATGCGGT CGGTGATTGA CCAATACACG
CTGGACAAGC AGAAAGCGCC CCAGTCTCTG GATGACCTCG TCTCCGCCGG GTATTTGAAG
TCGATTCCGA AAGACCCAAT GACGAACGGG ACTGAGTGGC AAACGGTCCA GGAAGACAGC
CTCATGTCCG TGGATCAACA GGAGCCGGGC ATTGTGGACG TCCACAGCAC GTCGAACGCT
ACGGCCTCAG ACGGGTCCAC CTACAGCAGT TGGTAA
 
Protein sequence
MVMRRRQRGF TLIELMIVMS IIVILLGIAI PNYRNSIIRA RESVLKDDLF TMRSVIDQYT 
LDKQKAPQSL DDLVSAGYLK SIPKDPMTNG TEWQTVQEDS LMSVDQQEPG IVDVHSTSNA
TASDGSTYSS W