Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1980 |
Symbol | |
ID | 4069366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2372766 |
End bp | 2373989 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983993 |
Product | cystathionine beta-lyase |
Protein accession | YP_591055 |
Protein GI | 94969007 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.865383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGTTT GGACAATGTC CGCGTTCGGG AACCTCTCGC CGCAAGTTCT CTATACTGTC GCCATGAAGA AGAGTTGGAA GACAAAGCTG ATCCACGGCG ATAGCCATGC CCCGGAGGGA TTCCGCTCGC TGGTAACTCC TACCTACCGC GGATCCACCG TGCTCTTCCC CGATGCTGAA TCGGTTACGG ACCAGTGGGA CCAGCATCGC GTGGGCTACA CCTACGGCCT CTACGGCACG CCGACGACGT TGGAACTCGC AGCACGCGTC TGCGAGCTCG AAGACGGCGA ACACACCATC ATCACCGCCG GAGGCCAGGG CGCGATTTCG CTCATCCAAC TCTCGCTGCT CAATGCGGGT GACCACATCC TGATCCCCGA GAATATCTAT GGCCCCAATC GCAAGTTGGC ATATTCCGTT CTCAAGCGCT TCGGCGTGGA GGTCACGGTT TATCCGCCCT TGATCGGCGC GGGAATCGCA GAGTTGATCA AGGACAACAC GCGTCTCGTC TGGTGCGAAA GTCCCGGCTC ACTGACGATG GAAGTGCAAG ATGTTCCTGC AATCGCGAAA GCGGCGCACG CCCGCGGCGC GCTGGTAGTG CTCGATAACA CCTGGTCGTC TGGAATCTTT TTCCGGGCCT TCGACCACGG CGTTGACGTC GAGATGCAGG CGCTCACGAA ATATGTCGCT GGCCACAGCG ATGTTCTTCT TGGCGCAATT ACTATTCGCG ACCGCGCGAT CTACGAAAAG CTCGGCAATA CCTACCAGGT GCTCGGCTGC GCCCCATCGC CTGATGATTG CCAGCTCGCA CTACGCGGCA TGAAGACGCT CGGGGTGCGC CTCGCGCAGA TTGGAAGTTC CGCCCTGAGG GTTGCGCAAT GGCTCGCAGC GCGACCGGAA ATCGAAACCG TGCTACATCC CGCGCTTCCC TCCTGTCCGG GCCACGAGTT CTGGGAGCGC GACTTCACTG GGTCGGCGGG ATTGTTTTCG ATCGTCTTTA AGTCCGGCCC CACGAAGCAA CAGGTGCAGG CTTTTGTGAA TGCACTGGAG CTTTTCGAGA TCGGATATAG CTGGGGTGGA GTCGCAAGCC TCGCCGTCAA TTACGACCTC AGCCACGCGA AGGGACGCTC GGAGTATGGC CATCGCATCG TGCGGCTGTA TATAGGGTTG GAGGAACCGG AAGAGCTTAT TGCGGATTTG GAGCAGGCAC TCGGAAAGAT CTAG
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Protein sequence | MSVWTMSAFG NLSPQVLYTV AMKKSWKTKL IHGDSHAPEG FRSLVTPTYR GSTVLFPDAE SVTDQWDQHR VGYTYGLYGT PTTLELAARV CELEDGEHTI ITAGGQGAIS LIQLSLLNAG DHILIPENIY GPNRKLAYSV LKRFGVEVTV YPPLIGAGIA ELIKDNTRLV WCESPGSLTM EVQDVPAIAK AAHARGALVV LDNTWSSGIF FRAFDHGVDV EMQALTKYVA GHSDVLLGAI TIRDRAIYEK LGNTYQVLGC APSPDDCQLA LRGMKTLGVR LAQIGSSALR VAQWLAARPE IETVLHPALP SCPGHEFWER DFTGSAGLFS IVFKSGPTKQ QVQAFVNALE LFEIGYSWGG VASLAVNYDL SHAKGRSEYG HRIVRLYIGL EEPEELIADL EQALGKI
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