| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1445 |
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| Symbol | |
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| ID | 4071634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1744883 |
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| End bp | 1746955 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637983454 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_590521 |
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| Protein GI | 94968473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.757577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTT CGCGCACGGT TGTGATCACG GCCAGAACTG TTATTTTTTC CATGATGTTG
GGGATGGTCG CCCCTGCATT CGCGCAGAAC CAGGCCCCCG CGCCGACGCC GAACCTTCCG
GACGCTCCGA AGGCGGCTTC CGCCTCCGCG CCGGTGAATG GCGGTGTGAT GAGCGTGGAC
TACAGCAAGC CGAAGACCTA CTGGTTCAAC CCGGTCGGTA CTTACTCGGA GCGCAAAGTT
CCAGCGCCGA ATTTCGCAAA CACCGCGCGG GTTGACTCGG TGATGCGCGA CGGCAAAATC
TATCTCTCGA TGAGCGACGC CCTTGCGCTC GCGCTCGAGA ACAACCTCGA TATCGCGATT
GCGCGCTATA ACCTTCCTAT CGCCGACACG GATATCCTCT CGACCAAGGC TGGTTCGGCG
GCACGCGGCG TGAACGCCGG CGTGGTGCAG AATACGCCCG GTGGCGGCGT GGGTGGAATT
GGGGCCAGCA GCACGGGTGG CGGCGCCGGC GGCACGACGG CCGGAGCAGG CGGCGTGGGT
ACTGGTATAG GTGGCATCGT CGCCAGCACG ACAGGCGCGG GCTCCACGGT GGGCAACTAC
GATCCGTTTA TCACTGGCAA TGTTCAGGGT GAACACACGC GTGCCGTAGT GACGACTAGT
TACATCCCGG TACCGTTCAT CGTGCAGAAC AACACGACGT ACAACTTTAA CTATGCGCAG
TCGTGGTACA CCGGTACGTC GGCGAACATT GGCTGGCAGA ACACTCGCCA GGCCGGTGGA
TTGAACGTGC TGGATCCCTA CCTCAATAGC ACCTTCCGCT TCACGCTGAC GCAGCACTTG
CTGCAAGGCT TCGGACTTGG GCCGAATATG CGATTCATTC GCATCGCCCA GAACGATAAG
AAAATCACCG ACAGCGCGTT CCGGCAGCAG GTCCGTGAGA CGGTTTCGCA GATCCAGAAC
ATCTACTGGG ACCTGGTTGC GGCCTACGAA GACGTAAAAG TGAAGCAGCG CGCTCTTGAA
TTTGCGCAGC GCACCTTCTC CGACAATCAG AAGCAGGTGC AGATTGGCAC CCTGGCTCCG
ATTGAAGTGG TGCACGCACA GAGCACGGTG TCGACCGCGC AGCAGGACCT GATCGTTTCG
CAGACGAGCC TTCAGCTGCA GCAGTTGCTG ATGAAGAATG CGATCACCCG TAACATGGGC
GATCCGATTC TCGCGGCGGC GGAAGTGATT CCAACCGACA CGATGCAGGT GGATGCCAAC
GAGGTCGACG CTTCGGTGGA CGAGTTGATC AAGACGGCGC AGGAACACAG CCCGGAAATC
GAGCAGGCGC AGATTGACTT GAAGAACCGC GAAATCACCA TGAAGTCGAC GAAGAACGCG
CTGCTGCCCT CGTTGGACGC CTACGGGTTC TACGGGGCGG CTGGTAACGC TGGAGAGCCA
ATCCCCGGAG CGGGCAGCAC GATTAACCCG TCCGGCTACG GCGATGCTCT TGGTCACCTC
GTGGACAGCT CCTCGCCGGA CAAAGGTCTC GGTGTGACTC TTACTATCCC GATCCGCAAC
CGCGCGGCGC AGGCCACGCA GGTTCGGTCG CAGCTGGAAT TCCGCCAAGC GCAGATGCGT
TTGCAGCAGC TGTTTAACCA GGTAAACATC CAGGTGCGCA ACGCGGCGTT TGCGGTGCAA
CAGGACCGCG CCCGCGTGAA GGCCGCGCAG GCCAGCCGCG AATATGCGTT GCAGAGCCTT
GAGGCCGAGC AGAAGAAGTA CGCTCTCGGT GCGTCCACGA GCACGCTGGT ACTGCAGAAC
CAGAGCGGGT TCGAAAACGC CGAGAACTTA CTGGTTTCGG CGCTCACCGC CTATGAGAAG
CACAAGGTCG AACTGGATCG TGTGACATCG CAGACGCTGG ACAAGAACCG AATCGAACTG
GCCGACAGCA CCAAGGGCGT GGTAAACACC GCGCCGCAAG TGCCGGGGGT GATCAAGATC
ACCTCGGACG TCAACAACCC GGCGAACGAG CCACAGCACC CAGCGCCGCC GCAGCAGCCA
CAACCGGAGA CGCCGCAACA GCCGCAGAAG TAA
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| Protein sequence | MSVSRTVVIT ARTVIFSMML GMVAPAFAQN QAPAPTPNLP DAPKAASASA PVNGGVMSVD
YSKPKTYWFN PVGTYSERKV PAPNFANTAR VDSVMRDGKI YLSMSDALAL ALENNLDIAI
ARYNLPIADT DILSTKAGSA ARGVNAGVVQ NTPGGGVGGI GASSTGGGAG GTTAGAGGVG
TGIGGIVAST TGAGSTVGNY DPFITGNVQG EHTRAVVTTS YIPVPFIVQN NTTYNFNYAQ
SWYTGTSANI GWQNTRQAGG LNVLDPYLNS TFRFTLTQHL LQGFGLGPNM RFIRIAQNDK
KITDSAFRQQ VRETVSQIQN IYWDLVAAYE DVKVKQRALE FAQRTFSDNQ KQVQIGTLAP
IEVVHAQSTV STAQQDLIVS QTSLQLQQLL MKNAITRNMG DPILAAAEVI PTDTMQVDAN
EVDASVDELI KTAQEHSPEI EQAQIDLKNR EITMKSTKNA LLPSLDAYGF YGAAGNAGEP
IPGAGSTINP SGYGDALGHL VDSSSPDKGL GVTLTIPIRN RAAQATQVRS QLEFRQAQMR
LQQLFNQVNI QVRNAAFAVQ QDRARVKAAQ ASREYALQSL EAEQKKYALG ASTSTLVLQN
QSGFENAENL LVSALTAYEK HKVELDRVTS QTLDKNRIEL ADSTKGVVNT APQVPGVIKI
TSDVNNPANE PQHPAPPQQP QPETPQQPQK
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