| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1139 |
|---|
| Symbol | |
|---|
| ID | 4069910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1417932 |
|---|
| End bp | 1418942 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637983149 |
|---|
| Product | metallo-beta-lactamase superfamily hydrolase |
|---|
| Protein accession | YP_590216 |
|---|
| Protein GI | 94968168 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.187703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0577692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG TTCACTTTCT GAATGTGAAA AATGGTGACT GTTCGATCAT CCAACACAAC
TCTGGCCGAG TTACGATGAT CGACGTTTGT AATGCCAGCC CGACTGAGGA ACTGAAGGAG
CAGATAATCA AGGCGGCTGC GGATTTGCAA AAGGGCGTGA ATGGTGATTT CAGACAGAAG
CTCTTCCCGG TGAATCCTGT CTCCTATTTG AAGCAGCGAG AGATCGCGTC TATTTTTCGG
TTCATCATCA CCCATCCGGA CATGGATCAC ATGGACGGGA TCAAGTCAGT TTTTGACGCG
TTCTCTCCCC TCAATTTTTG GGATCACGAC AATAACAAAG AGATGAACTT CGAGGACGGT
AGTCCATACG ACGAGGACGA TTGGAACTTC TATACCCTAT TGAGAGACGG GAAACCCGAG
CACGACCCCA AAAGACTCAC CTTGTTCTCT GGAACGGCGG GCCAGTACTA CAACCAAGCA
GAGGGTGGGG GCCAAGGTGG CGACGGATTA ACGATACTGG CACCCACGTC CGGTTTGGTT
ACACAGGCAT GTGAGGATAA AGAGTTTAAT GATTGCTCCT ACGTCCTTCT CTACCGAACG
GGAAATAACA AGATCATTTT CGCAGGCGAC TCCGAAGACG CGACGTGGGA ACACATATTG
GCAAATCATG GGGATGCGGT ACGAGACGTT GACGTCCTAA TTGCACCTCA TCATGGGCGG
GATTCAGGAC GAGATTGGGA ATTTCTCGAT GTGCTAAAGC CAGCATTGAC GTTATTCGGA
AATGCAAGCT CCGAACACCT CGCCTATCAA GCATGGTGGA ATCGCGGGCT GCCTATCATC
ACGAACAACC AAGCGAACTG TATTGTGCTG AACCCGAGCG TTTCTCCGAT CGATGTATAC
GTCACATGTG AGCAGTTTGC GCGACTTGCG AACCCATATA CTCAGTATTC CGCCTTTTAT
GACGCCTATT ACTGGGGCAG CGCAGCAAGA AAGAAGGCTG TCGGTAAATA G
|
|---|
| Protein sequence | MATVHFLNVK NGDCSIIQHN SGRVTMIDVC NASPTEELKE QIIKAAADLQ KGVNGDFRQK
LFPVNPVSYL KQREIASIFR FIITHPDMDH MDGIKSVFDA FSPLNFWDHD NNKEMNFEDG
SPYDEDDWNF YTLLRDGKPE HDPKRLTLFS GTAGQYYNQA EGGGQGGDGL TILAPTSGLV
TQACEDKEFN DCSYVLLYRT GNNKIIFAGD SEDATWEHIL ANHGDAVRDV DVLIAPHHGR
DSGRDWEFLD VLKPALTLFG NASSEHLAYQ AWWNRGLPII TNNQANCIVL NPSVSPIDVY
VTCEQFARLA NPYTQYSAFY DAYYWGSAAR KKAVGK
|
|---|
| |