Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1066 |
Symbol | |
ID | 4068715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1335134 |
End bp | 1338715 |
Gene Length | 3582 bp |
Protein Length | 1193 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637983074 |
Product | hypothetical protein |
Protein accession | YP_590143 |
Protein GI | 94968095 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0974046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCGAA GCTCGATACG TTGGCTTACA AGTGTGTTTA GTCTCTCCCT CCTCCTCTCC CCCGCGCTCC GTGCGCAAAA CCAGGCAGAC AATCAGACTC ATCGAGTCGG CGAACCATTC GTCATTTGGG AACTGAAGCA CGACGTCTCG CCACCACTGC GCGACATGGC GCGCTGGTCG CAACCGCCTC ACGCCAAACA CGAAGCTGAA CCGGTGCGCA GGATTCCAAT GCCGCCATTT CCGCCAGCAC AGCAGGACGC CGTGATCCAG CGGCAATCGC TGACCACGAA TCTTGCCGCC AGCACAGGCT TGAACTTTGA AGGCCTTGGC AACGGCCAAT ATGGATTCAC GGTCAACAGT GCTCCGCCCG ATACAGACGG ATACGTCGGC ACCACGCAGT ACGTGCAGGA AGTAAACAGC TCGTATGCGG TGTTCAATAA ATCCACCGGC GCGCTGATTG CGGGGCCATT TGGGACTAAC TCTTTGTGGA GTGGCTTCGG CGGCGGTTGC CAATCGAACG ATGACGGCGA CGGCATCGTG CTTTTCGATA AGGCTGCGCA GCGCTGGGTC ATCACCCAGT TCTCGGTGTC GAGCACCCCG TACTTGGAGT GCATAGCGGT TTCGACCTCG GCGGACGCGA CCGGCACGTA CACCCGCTAC TCGTTCCAAT ACTCCAACTT CCCGGACTAC CCGAAGCTTG GTGTATGGCC CGACGGCTAC TACATGTCGT TCAACATGTT CAACGGAACG ACGAATGCGT TCCTTGGCGC CCAGGCTTGC GTTGCCAACC GCGCCAAGAT GATCGCCGGC CAGACCGCGA ACCAAGTCTG CTTCCAGCAG AGCTCTTCGG TCGGCGGGTT GTTGCCTTCG GATCTCGACG GCGCGACGCC TCCACCGACC GGAGCACCCG ACTATTACTT CACCTACGGA ACCAATTCGC TCCAGATGTA CAAGTTCCAC GTGGATTGGA CGACAACGTC GAACTCGACA TTCACGGGCC CGACGAACAT CAGCGTTGCT TCCTTCACCC CGCTTTGCAG CGGCGGCACT TGCGTTCCGC AGCCGAGCAC GACGAACAAA CTGGACTCAC TCGCCGATCG CTTAATGTTC CGCGTGGCTT ATCGCAACTT CGGTTCACAT GAATCGTTGG CGATCAGCCA TTCCGTAACG GGCGGCGTGC GCTGGTACGA AATCCAAAAC CCGGCAGGAA CACCCACCGT AGCGCAGCAG GGAACGTTCG GTCCTGACGG CAGTACACGC TGGATGCCGA GCGTTGCAAT GGACCAGGCT GGCGACATGG CCATCGGTTA CAGCGTGTCC AGTTCGTCGG TATCGCCATC GGTGCGCATT AGCGGCCGCG TGCCGACCGA TCCTTCCGGC ACTCTGGAAA CAGAAACCAG CGTGGTAGCG GGCGCGGGAT CGCAGAACGG AACACTTACC CGCTGGGGCG ACTATAGCGC GATGACGGTG GACCCGGTGG ACGACTGTAC CTTCTGGTTC ACGGAAGAGT ACATGAAGAC CACGGGAACC TTTAACTGGA ACACGCGTAT CGTTTCGTTC AAGTTTCCCG GTTGCGGTTC GAGTGGTCCC ACGGGATCGG TCAGCCCGAC GAGTCTGACT TTCGCGAGCA CGACGGTCGG CAGCACGAGC GCTTCCCAAC CCATAACCCT CAGCAATAGC AGTTCCACCG CGTTGAGCAT TACCAGCATC GCGGCGAGCG GCGACTTTGC GCAAACCAAC AATTGCGGTA GTTCACTGGC CGCAAACTCC TCGTGCACCA TCAACGTTAC GTTTACTCCA ACTGCCACTG GCACACGGAC GGGAACTCTC ACCGTCAGTG ATAACGCAAG CAATTCACCG CAGACGGTGA GCCTCACAGG AACCGGCGCG AGCAGCGGTA CGCCGCAAGC AACGCTGAGT CCGACGAGCC TCACTTTCGG CAGCACAAAT GTCGGCACCA CCAGCGCAGC GCAGAACATC ACGCTGACGA ATGGAGGATC CGCTACGCTG AGCATCAGCG GTATCGGTAT CAGCGGCGAC TTTGCCCAGT CCAACAACTG CGGTACTTCG GTTGGTGCAG GTGGAAGTTG CACCATCAGC GTAACTTTCA CTCCCACGAC GACGGGCACG CGTACCGGCA CGCTCTCGGT TACGGACAAC GCCACTGGCA GTCCGCAATC GGCAGGCCTG ACGGGCACGG GTGCAACCGG CGGTGGAGGT GGTCCGCAGA CCGCGCTCTA CAGCAGCACA TTGAAAGCGC CGCAGTGCGC GACGGTTGGC TCCTCGTGCG ACTCCGGTAC TTCGCTGCTG AACGGTCGCG ACACGATGTC GGGGGGCGCC GAGCCGAACC AGCCGAACAC GATCAACAGC TCGTGTGCGG ATGGTACGTC GGGCACCTAC CACTCGGATG AGTCCGTTGA TCGCGTGCAG ATCGCGACCA GCGATGGCAC CTCGTTCGCA CCGGGCAAGA CTGTGACGGT CAGTGCTACG GTGTGGGCCT ACAGCACATA TACCTCCGAC CACTTGGATC TCTACTACGC GGCGAACGCT AACAGCCCGA CGTGGACAGC GATCCAGACC AATATCACTC CCGCCGGCAG CGGTGCACGG ACGATCACCG GTACTTTCAC GTTGCCTTCG GGCAGCTTGC AGGCGGTACG TGCCAACTTC CGCTACCAGG GATCCGCGTC ATCCTGCAGT ACCGGCGCCT ACGACGATCA TGATGATCTC GTGTTCGCCG TTGGCTCGGC GGCCCCGGAC TACTCTCTCT CTGCTTCTCC GAGCAGCGTG AGTGTGATCC AGGGTTCGAA CGCAAACAGC ACGATCACCG TGACGCCAAC GGGTGGCTTC AGCGGATCGG TTTCGTTGTC TGCCTCCGGC TTGCCGGCCG GCGTGACCGC GGTCTTCAAT CCGACGAGCA CCACCAGCAC GAGCACGTTG ACGTTCACCG CAAGCAGTAC AGCCACGCTG GGCACTTCCA CGGTGACGAT CACGGGAACG TCCGGCACCA CTACTCACAC AACCAATGTC ACGCTGACGG TGAATTCACC GGGCGGCGGT GCACAAACGG CGGTCTACAG CAGCACACTG AAAGCGCCGC AATGCGCTTC CAGCGGAACA TCGTGCGATT CAGGTACGTC ACTGTTACTC GGACGCGGCA CGATGTCGGG TGGCACGGAA GTGAACCATC CCAACACGAT CAACAACTCG TGTACTGACG GCAACTCAGG CACCTTCCAC TCCGACGAAT CGAACGATCG ACTTGTGATC GCTTCGACCG ATGGAACCGC GTTGACCCAC GGCAAGACCG CGAAGATTAC TGCGACGGTC TGGGCGTGGA ACACCGGTTC CTCCGACTCT CTCGACCTGT ACTACGCTGC CAACGCCAGC AGTCCGACTT GGGTGCTGAT TGGAACACTC ACGCCGACCG CGGGCGGACA GCAGACGTTG TCCACCACAT TCACTCTGCC GACCGGAAGC GTGCAGGCAA TTCGAGCGAA CTTCCGTTAC CAGGGATCCG CATCGTCGTG TAGCACCGGT TCCTACGACG ATCACGACGA CTTGGTGTTC GCGGTGCAAT AA
|
Protein sequence | MSRSSIRWLT SVFSLSLLLS PALRAQNQAD NQTHRVGEPF VIWELKHDVS PPLRDMARWS QPPHAKHEAE PVRRIPMPPF PPAQQDAVIQ RQSLTTNLAA STGLNFEGLG NGQYGFTVNS APPDTDGYVG TTQYVQEVNS SYAVFNKSTG ALIAGPFGTN SLWSGFGGGC QSNDDGDGIV LFDKAAQRWV ITQFSVSSTP YLECIAVSTS ADATGTYTRY SFQYSNFPDY PKLGVWPDGY YMSFNMFNGT TNAFLGAQAC VANRAKMIAG QTANQVCFQQ SSSVGGLLPS DLDGATPPPT GAPDYYFTYG TNSLQMYKFH VDWTTTSNST FTGPTNISVA SFTPLCSGGT CVPQPSTTNK LDSLADRLMF RVAYRNFGSH ESLAISHSVT GGVRWYEIQN PAGTPTVAQQ GTFGPDGSTR WMPSVAMDQA GDMAIGYSVS SSSVSPSVRI SGRVPTDPSG TLETETSVVA GAGSQNGTLT RWGDYSAMTV DPVDDCTFWF TEEYMKTTGT FNWNTRIVSF KFPGCGSSGP TGSVSPTSLT FASTTVGSTS ASQPITLSNS SSTALSITSI AASGDFAQTN NCGSSLAANS SCTINVTFTP TATGTRTGTL TVSDNASNSP QTVSLTGTGA SSGTPQATLS PTSLTFGSTN VGTTSAAQNI TLTNGGSATL SISGIGISGD FAQSNNCGTS VGAGGSCTIS VTFTPTTTGT RTGTLSVTDN ATGSPQSAGL TGTGATGGGG GPQTALYSST LKAPQCATVG SSCDSGTSLL NGRDTMSGGA EPNQPNTINS SCADGTSGTY HSDESVDRVQ IATSDGTSFA PGKTVTVSAT VWAYSTYTSD HLDLYYAANA NSPTWTAIQT NITPAGSGAR TITGTFTLPS GSLQAVRANF RYQGSASSCS TGAYDDHDDL VFAVGSAAPD YSLSASPSSV SVIQGSNANS TITVTPTGGF SGSVSLSASG LPAGVTAVFN PTSTTSTSTL TFTASSTATL GTSTVTITGT SGTTTHTTNV TLTVNSPGGG AQTAVYSSTL KAPQCASSGT SCDSGTSLLL GRGTMSGGTE VNHPNTINNS CTDGNSGTFH SDESNDRLVI ASTDGTALTH GKTAKITATV WAWNTGSSDS LDLYYAANAS SPTWVLIGTL TPTAGGQQTL STTFTLPTGS VQAIRANFRY QGSASSCSTG SYDDHDDLVF AVQ
|
| |