| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0794 |
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| Symbol | |
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| ID | 4068575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 982769 |
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| End bp | 984943 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982801 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_589873 |
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| Protein GI | 94967825 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAAA CCGCCAATCG CCAGCAGTTG GTCCGCTTCG GGCCGTACTG CGCAAACCGG
CAAACCGGTG AACTCTACAA GTTCGGCACC CGGCTAAAAA TTCAAGACCG GCCGTTTGAG
ATCCTGTCCA TCCTGCTGGA ATCTCCCGGC GAACTAGTCA CTCGCGAGGA TCTTCGCACC
CGCTTGTGGC CGGACGGCAC CTTTGTCGAC TTCGATAACA ACATCAGCAC CGCCGTGCAC
AAGCTGCGAA GCGTTCTCTC CGACTCGGCC GACGCCCCGC GATATATCGA GACCGTAGGA
GGCCGCGGGT ATCGCTTTAT CGGTACTGTC GAAAGCGACG TCCCTGCCGA TTCCGAATTG
GCTGCCTCGG TCCAGGCTCC CGCCAATAAA CCTGAAACCG ACTCGACGAG TGCGAGGGTT
GTCTCCGTAA TAGTGAAGAA GCCGGTCGCT CTCACCACGG CTCCGGCCAG CGTCGAAACC
CGATCACGTA GATGGTGGCT GCTCATCCCC GCACTTGTCT TGCTCGGATT GATCGCCGCA
GCAGCGTGGA TCTACTTCAC CCCACCCGCC GAACCACGCG TGGTAAAGAT CGTGCAGCTC
ACGCGCTCGG GCACGTTGCA TCCAAACCAA AACGTTGTCA CCGATGGTCC GCGCATCTAT
TTTCTTGATC GCACGGGTCG CAACTTCGTG TTGAAGAGCA TGGCCGCCGG TGGCGGATCT
CCCACCCCGG TGCAGATCGG GCTTCCGCAC TACGACGTCC AGGACATTTC CCACGACAAC
TCCGAATTGC TGCTCCGTGA GCTTACGGAG GAGCACGAAC TGCGACAGCT ATGGATTGCC
GATATTGTCG GAGGCTCGGC GAGGCGAGTA GGCGATGTGG TCGCGATGGG AGCTACGTTC
TCACCCGACG GACAATCCTT GCTCTATTCA CAGGACGGCA AAGTACTGAC CTGCGATCGC
CAGGGTGGCA ATGCTCGCGT ACTGTTCGAG ACCCCAGGCG AGGTGACCCG CATGCGCTGG
GCGCCCGCTG GCGACGTGTT GCGCATGGTC ATAATCAACT CAAGCGGCGT CGGAACCGCT
CTCTGGGAAA CCCGGCCAGG AGACTGGAAG TTGCGACGCG TGCTGTCCGA TCGAGCAATG
CAGGACGAAC CCTGGACGCT GAGTTGGAGC GCGGATAGCC AGTGGCTTGC GTTCAGCGCA
GTCACGCCCA GTGGTCGAGA GATCTGGATG CTTGGCCGCG ACCACTGGTG GAAACATGCG
CCGCCGCGTC CCACCCGACT CATCGGCGGC CCCATCGATT TTGATCTGCC GACATTCAAC
AAGAACGACA ACACTCTCTA CGCGGTGGGA TCGCACCGGC GAGGGCAATT GCTGCGCTAC
GACGACGCCT CGCACAACTT CGTCCCTTAC CTGGGCGGTC CGTCGGTGGA TCAACTCGAC
TTCACGCACG ACGGACAGTG GGTCACGTAT GTCACCTACC CCGAACACAT CCTCTGGAGA
TCACGAGTTG ACGGGACTGA CGCACAGAAA CTCACAGAGG CTCCCATGCG TGCCTTCGTG
CCAAAGTGGT CGCCGGATGG ACAGTCCATC GCCTTCCGCG CAAACTTTGC CGCGGGTAAA
CCGTGGCAAA CCTATGTGAT TTCGTCAAAG GGCGGAGTTG CCCAACTCGT TGCGAGTGAG
CTATCGAACG TCGGCGGTCC GGGCTGGACT GCGGACGGCC ATGGCTTGAT CTTAGTCGGA
GAACACGACG AGAGTTTGCG TATCTTCGAT CTTCACTCGG GAAGCAGCAA GTTCATTCCA
AATTCGCAAC ATATGTCGGA CCCCGTCGTA TCGCCAAGCG GACGATACCT TCTCTCCGGC
AATCCCGACG ACAACCGCAT CGATGTCCTC GACCTGCAGA CCGGCCAAAG ACGCCACCTC
GCCGACCAGG TGGATTACCC CGCATGGTCG CGCGACGAGA AGTTCGTCTA CTTCAATCGC
TTCTCAGCGT GGTCTCCCGC GATGTACCGA ATTCGAGTGG CCGACGGCGT TGTCGAAAAA
CTCTTCGATC TCGACGGCTT CGCGGCAACC GGCAGCTGGT CCACCTGGAG CGCACTGGCG
CCGGATGGCT CGGTGCTCCT GCTGCGCGAT CTTGGAGGAA CTGATCTCTA CGCGATTCAG
TGGGAAGCGC ACTGA
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| Protein sequence | MGETANRQQL VRFGPYCANR QTGELYKFGT RLKIQDRPFE ILSILLESPG ELVTREDLRT
RLWPDGTFVD FDNNISTAVH KLRSVLSDSA DAPRYIETVG GRGYRFIGTV ESDVPADSEL
AASVQAPANK PETDSTSARV VSVIVKKPVA LTTAPASVET RSRRWWLLIP ALVLLGLIAA
AAWIYFTPPA EPRVVKIVQL TRSGTLHPNQ NVVTDGPRIY FLDRTGRNFV LKSMAAGGGS
PTPVQIGLPH YDVQDISHDN SELLLRELTE EHELRQLWIA DIVGGSARRV GDVVAMGATF
SPDGQSLLYS QDGKVLTCDR QGGNARVLFE TPGEVTRMRW APAGDVLRMV IINSSGVGTA
LWETRPGDWK LRRVLSDRAM QDEPWTLSWS ADSQWLAFSA VTPSGREIWM LGRDHWWKHA
PPRPTRLIGG PIDFDLPTFN KNDNTLYAVG SHRRGQLLRY DDASHNFVPY LGGPSVDQLD
FTHDGQWVTY VTYPEHILWR SRVDGTDAQK LTEAPMRAFV PKWSPDGQSI AFRANFAAGK
PWQTYVISSK GGVAQLVASE LSNVGGPGWT ADGHGLILVG EHDESLRIFD LHSGSSKFIP
NSQHMSDPVV SPSGRYLLSG NPDDNRIDVL DLQTGQRRHL ADQVDYPAWS RDEKFVYFNR
FSAWSPAMYR IRVADGVVEK LFDLDGFAAT GSWSTWSALA PDGSVLLLRD LGGTDLYAIQ
WEAH
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