| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0583 |
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| Symbol | |
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| ID | 4068942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 712481 |
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| End bp | 715093 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637982588 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_589662 |
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| Protein GI | 94967614 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.958543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGG TCCACCCTGT CAAAATGTCC GATATTTCCA AGCATTTGGA AAAGGCCGAA
AAGTATCTCC AGAAGGGCAA GCACGAAGAT GCCCTTGAGG AGTATTTGCA GGTATTGGAC
GAACAGCCGT CGAATCAAGG CGTTCGACAG ACAGCCGCTG AACTCTGCGT CTCCCTTGGC
CGCACTTCCG ACGCGGCCAC AATGTTCGGC CAGATCTTCG ATTCCCAGTG TTCCATCGGC
GATAACGCCC GCGCTGTCAT CACTTACAAG AAATTAGTCC GGGTCGGGAA ACCCTCCTTG
CAGCAGATGC TGCAATTCGC CCACATCCAG GAGCGCACCA ACCGCAAAGA GGCGCTGGAG
GCGTACGTCA ACCTGGGTAG TGAGTACCGG ACCGCTGGAA AACTCAGCGA TCTGCTGGAG
GTTTACCGGA GAATCTCCTC GCTCGATCCT TCGATCGAGA ACTATGCCCA GGAAGGCGAT
CTGGCAGCGG AACTGGACGA TCCGAAGACA GCTGCGGTCT CCTTCGTCCA GGCCGGAATT
CTCGTTGAAA AGTCCGGTGG CGATGCCTCT GAGTGGTATG AGAAGGCCTA CCACTACGAT
CCGACGAACC CGGGGGCTGC CTTTGGTCAT GGGCACGCGC TGTTGCTTCG CGGAGAAGCC
GAAGAGGCAG TTACGATCCT CGAGCCGCTG GCGAACTATC CTTCGAGCCC GATTGAAGCC
CGGGAGGCCT ATGCCCGCGC ACTGCTGCTT GCGGGACATC TCGAGAAAGC CGAACCCGTC
GTCTGGAAGC TGTATGAGTT CGATTCGCGA AAGCTCGACG ACATCCTGGA ACTGATTGGC
GACTACGTTG ACCTGCAAAA GACCGACAAC GCACTGCGCC TGACGAAAAA GCTGGAAGAG
CAAATGTCGA AGACCGGCCG TCGCCGGGAG TTCGTGCAGA TCATGCAGGA GATGCTCGAA
CAGAAATCGC CCTCCATCGA GTTCCTGTAC TACATGGTGG AGCTTTACAA CTCCAACAAC
CGCGAACACG ACTACTGCCA CACGCTGCTG CGCTTATTCG AATTGCATTA CGCCGCTGGC
GAGTTCCTGC GCGCCGGAGA TTGTCTTGAC CGCGCGGCGG AAGTGGACCC CTACGAGCCG
GGTCATACGA ACCGCATTGA AATGTTGCGC GGCAAGCTCG AAGACAACCG TTTCAACGCC
ATCGCGAACC GCTTCGGCAG TGTGATCAAG GTCGAGCAGC AGGGCGGACA ATCGTCGAAC
AACAACAATA TTTCGACCCA TGCCGCCAGC GACAACGAAA CGACGGTCCT CGAGGACCTG
ATCCTCCAGT CCGAAATTTT TATGCAGTAC TCCATGCGCT CGAAAGCGGT CGAGCGGCTG
GAACGTATTC ACAAGCTGTT CCCGCATGAG GAAGAGCGCA ACGAGAAGTT GCGGAGCCTC
TACAACAATG CTGGGTTCTT CCCGCAATAC TCGGACCATC CTTCTGCGCA GCAGATGGTT
GTAGCGCCCG TGACGCGCGG GGTGGACCAG CAGCCTGCTC CTCCCATACC GAACGCGGTT
GCCGCCGAGA ACTCGGTGGA CAACATCTCG CGAGTTACTG AAATCACGCG GAACATCTAC
CGCCAGGGAA ACGTGAAGGC GGTGTTGTTC GCATCCGTAA ACGATATTGG ACGCCACTGG
AATTCGAGCC GCTGCGTGGC GGGGTTGTGC TCGCCGGGCA AGCCGCCCTC GGCAGCGCTG
GAATACTGCG CGCCGGGCAT TCCGCAGTCG GACGTTGCGG CGATCGTGAA ATTGATCGGA
GTTCTCCATC CGCTGGCGGT AGCGATGGGC ATGGTTTCCA TCTCGAATGC CCGCTCCGCG
CATGAACTTG CGCCGGTGCA TGACGTCATC GAGACGCTCG GCATTGAGTC ATTGCTGGCA
GTCCCACTCT CCGAAGGCGA CGAGCAGGCC GGCATCTTGA TCTTGCAGCA ATGCACCCCG
CGGTTGTGGG GGCAGACGGA CGTCGTAGTG CTGCGCACCA TCGCCGACCA GATGGTTCTG
GCGGTACACA ACGCGAGACT CAGAAGCCTA GTCAAGAACC TTGCTGTGAC GGAAGAGAAG
TCAGGCTTGC TGAAGCGTTC GTCGTATCTC GACGTTCTGC TCTCGGAAGT GAAGCGCGCT
TTGCAGGCCA ACGCGCCGGT CACGCTGATG CTGGTGGAGA TCGGCAAAGC CGCGGGGCTG
ATCCGTGACG TCGGCGAAGC CGCTGTAGAT TCCGTGCTGC AGCAGGTAGG ACAGGTGGTA
CAAGCACATT TGCGGCAGAA TGACGTGCCT GTGCGCTACG ACCTGACGCA GATCGCGATT
GTTCTCTCGG ATACGAACGA CAAGAACGCG TTCTTTGTCG CCGATAAACT TCGCAAGGTG
CTTGGGGGCA CGAAAATCCC CGGTCGTGAC CAGGCGCTGC CGATCTCGAT TGGCATTGCC
GAGGCTGTGA TGAACCCGCA TTATGATCCG GTGGACGTGG TCACCGAGGT GATCAATCGC
CTGGAATCCG CGCTGGAAGC GGCGAAAGCC TCGGGCGGCA ATAAGTCGCA CTCGATCGCA
CCCGCATTCC TTACCGCCGC CGCGGGCGAC TAA
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| Protein sequence | MPKVHPVKMS DISKHLEKAE KYLQKGKHED ALEEYLQVLD EQPSNQGVRQ TAAELCVSLG
RTSDAATMFG QIFDSQCSIG DNARAVITYK KLVRVGKPSL QQMLQFAHIQ ERTNRKEALE
AYVNLGSEYR TAGKLSDLLE VYRRISSLDP SIENYAQEGD LAAELDDPKT AAVSFVQAGI
LVEKSGGDAS EWYEKAYHYD PTNPGAAFGH GHALLLRGEA EEAVTILEPL ANYPSSPIEA
REAYARALLL AGHLEKAEPV VWKLYEFDSR KLDDILELIG DYVDLQKTDN ALRLTKKLEE
QMSKTGRRRE FVQIMQEMLE QKSPSIEFLY YMVELYNSNN REHDYCHTLL RLFELHYAAG
EFLRAGDCLD RAAEVDPYEP GHTNRIEMLR GKLEDNRFNA IANRFGSVIK VEQQGGQSSN
NNNISTHAAS DNETTVLEDL ILQSEIFMQY SMRSKAVERL ERIHKLFPHE EERNEKLRSL
YNNAGFFPQY SDHPSAQQMV VAPVTRGVDQ QPAPPIPNAV AAENSVDNIS RVTEITRNIY
RQGNVKAVLF ASVNDIGRHW NSSRCVAGLC SPGKPPSAAL EYCAPGIPQS DVAAIVKLIG
VLHPLAVAMG MVSISNARSA HELAPVHDVI ETLGIESLLA VPLSEGDEQA GILILQQCTP
RLWGQTDVVV LRTIADQMVL AVHNARLRSL VKNLAVTEEK SGLLKRSSYL DVLLSEVKRA
LQANAPVTLM LVEIGKAAGL IRDVGEAAVD SVLQQVGQVV QAHLRQNDVP VRYDLTQIAI
VLSDTNDKNA FFVADKLRKV LGGTKIPGRD QALPISIGIA EAVMNPHYDP VDVVTEVINR
LESALEAAKA SGGNKSHSIA PAFLTAAAGD
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