Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0356 |
Symbol | |
ID | 4069598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 393335 |
End bp | 395029 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637982359 |
Product | alpha amylase, catalytic region |
Protein accession | YP_589435 |
Protein GI | 94967387 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.171609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.628947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC GGCTCCTCGT CCTTTCGCTC TTCTTCGCAT TCGCTCTCCC TGTTCTCGCT CAAACCACAG ATGCCGACTG GTGGCGTCAT GCGGTTATCT ACGAGATTTA TCCGCGCAGC TTCGGCGATT CCAACGGCGA CGGCCTCGGC GATCTCAACG GCATCACCGA GCACCTCGAC TACCTCAAGG AACTTGGGGT GGACGGCATC TGGATCTCGC CGTGCTTCCC TTCGCCGCAG GTGGACTTCG GTTATGACGT GAGCGATTAC ACGGCGATCG CGCCGGAGTA TGGCACCATG GCTGACTTCG ATCGCCTGAT GGCCGAAGCC AAGAAGCGCA ATATTCGCGT ACTGCTCGAC TTCGTGGTGA ACCACTCGTC CGACAAGCAT CCGTGGTTCA TCGAGTCTGC GTCGTCGCGC ACCAACCCGA AAGCTGACTG GTACGTTTGG AAGGACGGCA TTGGCGCCGA TAAGAAGCAG GTGCCGACTA ATTGGATCTC GCTCTTTGGA CACTCGGCGT GGGAGTGGGA CTCGAAACGC AATCAGTTCT ACTACCACAT GTTCGCCAAG GAACAGCCGG ACCTGAACTG GCGCAATCCG GAAGTGCAGA AGGCAATGTA CGGTGCGATG CGCTTCTGGA TGGACAAAGG CGTCAGCGGC TTCCGCCTCG ACGCCGTGGA CACGCTCTTC GAAGATCCCA ATCTGCACGA CGACCCCATT CTTCCCGGTA AAAAGAATGC GTATGGCGAT CAGGACGTCG AGCACAAATA TACGCAGGAC CTGCCGGAGA CCCATGATGT TTATCGCGCA ATGCGCCATG TAACGAACCA ATATCCCGGC GGCGTGCTCG TGGGCGAGGT TTATTTCGAT ACCGCCGCGC AGATGGCGAC GATCTATGGC AAGAACAACG ATGAGATCAA TCTCCCGATG GCGACGCAAC TCGGCTTCAC CAATAAGCGC GATGTATCGG AGATCCGGCG CAAACTCGAT GACCTGATGA CGTTGCCTGC GACCCAGACC GCGCTCATGG TTTTCGATAA CCACGACAAC GCGCGCAGCT GGGACCGCTA TGGCAACGGG CTGAACGATG CACAGCGCGC GCAATTTGCG AAGGTTGTCG CCGCCACTCT GCTGACACCG CGCGGCAGCG CGCTGATGTA CTACGGCCAG GAGATCGGCA TGAAGACCAC AACGCCGACG CGCCGAGAAG AGGTGAAAGA CCCCATCGGC CGCACTGGAT GGCCCAAAGA AAAAGGCCGT GACGGCGAGC GCACACCGAT GCAGTGGAGC AACGCGAAAG ACGCGGGCTT CAGCAGTTCG GATCATCCTT GGCTGCCGGT GCCGCCCACC TTCAAGCAGG TCAATGTCGC CGCAGAAGAC AAAGACCCGA ACTCAGTCCT GAACTTCTAT CGCGCGATGC TGAAACTCCG GCGCGAAAAT CCGGTGTTTC GCGATGGTGA CTACAAGGGC GTAAATGAGA ACAACAGCAA TGTTCTTGCC TTCACACGTA CCTCACCCCA AGGCACCGTG CTCGTGGTGT TGAACTACAG CGACAAAGCA CAGACGGCCG ACTACTCGCA ATCGGGCAAG GAAGCCAGAA CATTGTTAAG CACGTTTTCG AAATCCGACG GCGCGCAGAA ACTGAACGCG CTTACGGTTC CGGCCTTCGG TGTCTTCATC GGCCAAGTTC AATAA
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Protein sequence | MIKRLLVLSL FFAFALPVLA QTTDADWWRH AVIYEIYPRS FGDSNGDGLG DLNGITEHLD YLKELGVDGI WISPCFPSPQ VDFGYDVSDY TAIAPEYGTM ADFDRLMAEA KKRNIRVLLD FVVNHSSDKH PWFIESASSR TNPKADWYVW KDGIGADKKQ VPTNWISLFG HSAWEWDSKR NQFYYHMFAK EQPDLNWRNP EVQKAMYGAM RFWMDKGVSG FRLDAVDTLF EDPNLHDDPI LPGKKNAYGD QDVEHKYTQD LPETHDVYRA MRHVTNQYPG GVLVGEVYFD TAAQMATIYG KNNDEINLPM ATQLGFTNKR DVSEIRRKLD DLMTLPATQT ALMVFDNHDN ARSWDRYGNG LNDAQRAQFA KVVAATLLTP RGSALMYYGQ EIGMKTTTPT RREEVKDPIG RTGWPKEKGR DGERTPMQWS NAKDAGFSSS DHPWLPVPPT FKQVNVAAED KDPNSVLNFY RAMLKLRREN PVFRDGDYKG VNENNSNVLA FTRTSPQGTV LVVLNYSDKA QTADYSQSGK EARTLLSTFS KSDGAQKLNA LTVPAFGVFI GQVQ
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