| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0156 |
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| Symbol | |
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| ID | 4070068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 163915 |
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| End bp | 165216 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982156 |
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| Product | HipA-like protein |
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| Protein accession | YP_589235 |
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| Protein GI | 94967187 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0383905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00201616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCGTC ACGCTACCTA TGCCCCTCTA AACGTTTTCA TCAACTCGCG ACGGGTCGGA
GTTCTCCGTC GCGAGTCCTC AGGCGCCGTC GAATTTCGCT ACAGCGACGA GTGGCTCGCG
TGGGCGCACG CATTTCCGAT CTCACTATCT CTGCCTATGC GTCCGGAGAA ATACGTTGGC
GCTCCGGTTC TCGCAGTCCT GGAAAATCTA CTGCCGGACA ATGAAGCGAT CCTGCGACGA
GTCGCTGAGC GGGTGCACGC GAACGGAACC GACGCTTATA ACTTGCTTTC AGCAATCGGA
CGCGACTGCG TCGGGGCACT GCAGTTTCGA CCGGAAGACA CACAACCTGG CCCTGCAGGA
GTCGTTGATG GAGAGGAACT CGAGGGTCAC GGAATTGAGC AACTACTCGC AAACCTAACG
CGCGCGCCTC TAGGCCTTAC GACCGACGAT GATTTCAGGA TCTCTATCGC CGGAGCCCAA
GAAAAGACTG CTCTTCTCCG CTGGAATGAT CGATGGTGGA AACCGCTTGG CGCCACGGCG
ACCACACATA TTTTCAAGCG GCCGATAGGA ATGGCGCACA ATATTGACCT CAGCGATAGC
GTGGAGAATG AGTATCTCTG TCTCCGACTC ACGAAGGCAT TGGGAATTCC TGTTGCGAAT
GCGGAAATCG AGCAGTTTGG AAAACAGAAG GCATTGGTGA TTGAGCGCTT CGATCGTCTT
TGGACGAGCG ACAAGAGGTT GTTGCGCATT CCGCAAGAAG ACTGCTGCCA GGCATTCTCG
ATGCCACCAA CCAAAAAATA CGAAGCCGAG GGCGGTCCCG GAGCCGTGAA AATTCTTACC
CTCCTCAATG CTAGTGACAC GCCTACCGAC GACCAGAAGA TGTTCTTGAA AGCACTGATA
ACTTTTTGGC TACTCGGAGC GATCGACGGC CATGCAAAGA ATTTCAGTAT TCGAATCGCC
GAAGGCGGAC GTTTTCAATT GTCTCCCCTT TACGACATCG TCTCCGGCCA GCCGGCTGTG
GCAGCGGGCA GCATCCGCCA CAACCAATTC AAACTAGCGA TGGCGGTTGG GAAGAATCGG
CAGTACGTGG TGAACTCAAT CGCACCCCGG CACTTCGCCG AAACGGCTGC ACAGGCGGGC
GTCGGGCGAG TGGTCGTGGA GGAAGCGATG CAGGAGTTAC ATTCGGCGGC GGTGAAGAAT
GTGAGCCACG TTTTCAAAGA CCTTCCTTCC AAGTTTCCAA TGAAAATGGC AGAAGCGGTC
CAGAAAGGCT TCGACCGGCG CCTCAAGATG CTGAGTGCAT GA
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| Protein sequence | MPRHATYAPL NVFINSRRVG VLRRESSGAV EFRYSDEWLA WAHAFPISLS LPMRPEKYVG
APVLAVLENL LPDNEAILRR VAERVHANGT DAYNLLSAIG RDCVGALQFR PEDTQPGPAG
VVDGEELEGH GIEQLLANLT RAPLGLTTDD DFRISIAGAQ EKTALLRWND RWWKPLGATA
TTHIFKRPIG MAHNIDLSDS VENEYLCLRL TKALGIPVAN AEIEQFGKQK ALVIERFDRL
WTSDKRLLRI PQEDCCQAFS MPPTKKYEAE GGPGAVKILT LLNASDTPTD DQKMFLKALI
TFWLLGAIDG HAKNFSIRIA EGGRFQLSPL YDIVSGQPAV AAGSIRHNQF KLAMAVGKNR
QYVVNSIAPR HFAETAAQAG VGRVVVEEAM QELHSAAVKN VSHVFKDLPS KFPMKMAEAV
QKGFDRRLKM LSA
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