| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0154 |
|---|
| Symbol | |
|---|
| ID | 4069739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 163062 |
|---|
| End bp | 163565 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637982154 |
|---|
| Product | biotin/lipoyl attachment |
|---|
| Protein accession | YP_589233 |
|---|
| Protein GI | 94967185 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0511] Biotin carboxyl carrier protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.560413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00148686 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTACG ACATCGTAAT TTCGGAGAAG ACCTACCGCG TCGAAATCGC CCGCGCCGGA
AGCCGTTGGA GTGGCAAGAT CGATGGCCAG CCATTCGATG TTGACGCTGT CCCGACCGCC
CGCGACATTC TTTCCATCAT CGAAGGCGAG GGTAAGGCCT ACGAGGTGAA ACGAGAACGC
GCGCTGAACG GCGAACTCCA CATGCTGGTC GGAAGCTCCC GTTACTCCTG TGAGATCAAC
GATCCTCGTT CGCTTCGGAC ACGCCGTGCC GCCGCGGGCA GTACCGAGGG CCCGCAGAAG
ATCGTCGCGC CCATGCCGGG TAAAGTCGTG CGTATTCTTG TGCCTCAAGG CGGAGAAGTG
GAAGTGGGGA AGGGCGTCGT TGTCGTTGAA GCGATGAAGA TGCAAAACGA GCTGAAATCG
CCAAAGAGCG GGAAAGTACA GAAGGTCCTG GTGAGCGAAG GCGCGACGGT GAATGCGGGG
GACACGCTGG CGGTGATCGA GTAG
|
|---|
| Protein sequence | MVYDIVISEK TYRVEIARAG SRWSGKIDGQ PFDVDAVPTA RDILSIIEGE GKAYEVKRER
ALNGELHMLV GSSRYSCEIN DPRSLRTRRA AAGSTEGPQK IVAPMPGKVV RILVPQGGEV
EVGKGVVVVE AMKMQNELKS PKSGKVQKVL VSEGATVNAG DTLAVIE
|
|---|
| |