Gene Achl_1238 details

Gene Information

• Locus tag: Achl_1238
• ID: 7292684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter chlorophenolicus A6
• Kingdom: Bacteria
• Replicon accession: NC_011886
• Strand: +
• Start bp: 1363060
• End bp: 1363695
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643589644
• Product: Rhomboid family protein
• Protein accession: YP_002487318
• Protein GI: 220912009
• COG category: [R] General function prediction only
• COG ID: [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.000294506
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCTGGCC TGATGCGGAA CGGGGACTTC CGGGAGCGGC AGACGACGGC GGCGCGCGCC 
AAGGGTGGGC TGCTCGTCCT GGGCGGGTTC GTTGCGCTCC TGTTTGTCAT TGAGCTGTTC 
AACACGCTGA CGCTGGGGTC ACTGACCCGC ACGTTCGGAC TGCGGCCCAG GAGCGCGGAT 
GGGCTCCTGG ATATCTTCAC GTTTCCGCTG CTGCATGCCA ACCTGAACCA CCTGCTGTCC 
AACAGCTTTC CGCTGATCAT CTTCGGCTTC CTGGTGTTCC TCTCCGGGCT CCGGGTCTTC 
CTGACCGCCC TCGCGCTCAG CTGGCTGGGC TCGGGCATCA CCGTCTGGCT GATCGGTGAC 
GGCGGGATCA CTGTAGGCTC CTCTGGCCTC GTCTTCGGAC TCTTTGCCTT CCTCCTGGTC 
CGCGGCTTCT TCAACCGCAG CTGGAAACAG ATCCTCCTGG CCATGGTCCT GTTCATGGGT 
TACGGCAGCA TCCTGTTGGG CATGCTGCCC ATCGTGTCCG GCTTCGTTTC CTGGCAGGCA 
CATCTGGGCG GAGCCGCCGG GGGAGTGGTG GCCGCACTGA TCCTCCGCCC CCGTCCGGGC 
GCCGACAGGC AGCGGGACCG CGCAATTCCC CTATAA 

 

Protein sequence

MAGLMRNGDF RERQTTAARA KGGLLVLGGF VALLFVIELF NTLTLGSLTR TFGLRPRSAD 
GLLDIFTFPL LHANLNHLLS NSFPLIIFGF LVFLSGLRVF LTALALSWLG SGITVWLIGD 
GGITVGSSGL VFGLFAFLLV RGFFNRSWKQ ILLAMVLFMG YGSILLGMLP IVSGFVSWQA 
HLGGAAGGVV AALILRPRPG ADRQRDRAIP L