Gene Acel_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2153 
Symbol 
ID4484596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2436122 
End bp2437123 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID639730955 
ProductD-alanine--D-alanine ligase 
Protein accessionYP_873911 
Protein GI117929360 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TCGGACACGT TCTCGTCCTC GCCGGCGGTG TTTCCTTTGA GCGCGAGGTG 
TCCTTGGCGT CGGCCCGGCG CGTGATCGAA GCACTCCGGC GGTTAGGCGT GGACGTCGAC
CTGGTCGACG TCGACGCGTC CGTCCTCGAC CGCCTCACCG CTGATCCACC GGACGCGGTC
TTCATCGCCA TGCACGGTTC AGAAGGTGAG GACGGCGCCC TTCGGGAGCT GCTTGATCTG
GCCGGCGTCC CGTACGTCGG AGCCACGGCG GCCGGTGCCC GGCTCGCGTT TGACAAGACG
GTCGCGAAGG CCGTACTGCA AGCGGCCGGG GTGGCGGCGC CGAGGTCGAT TGCGTTCTCG
CAAACCGCCA TTCGGGACTT GGGCGGGCAC CAGCTCCTTG ACCGATGCGT ACGACGGCTC
GGCTTACCTC TGGTTGTAAA ACCTGCCCGA GGCGGTTCGG CGCTTGGCGT GACGATCGTG
CGGGAGGCGA CGGCGTTCGC GCACGCGCTG GTGACCTGCT TCGCGTATGA CACCGTTGCT
CTGGTCGAGC AGTACGTCGT CGGTACGGAG TTGGCGATCA GCGTTGTGGA AGATGACGAC
GGCACCCCGC GCGCGCTGCC TCCGGTTGAG ATTCGGCCGG TCGACGGCAT GTTTGATTAC
GCCGCCCGGT ATACCGCGGG CATGACCGAA TATCACGTAC CCGCGAGGAT CACAGAAACC
GCGCGGGACC GGGCGGTCGA TGTCGCGCTG CGGGCGCATC AGGCGTTGGG GTTGCGGGAC
CTCTCCCGCA CCGATGTGAT CGTCACTGCC GACGACGAGG TCCTTTACCT TGAGACCAAT
GTCGCTCCGG GAATGACCCC GACAAGTCTG CTGCCGATGG CGGCTGCAGA GGTTGGGATA
GACCTCGGCA CGCTCTGCCG AGACCTTCTG GTCCGTGCAG CGACCCGTGG ACCCAGTGAA
CCCGGCGCCG TCCCGAGTCG CTCACCCCAG GCTTTGCGGT GA
 
Protein sequence
MSDLGHVLVL AGGVSFEREV SLASARRVIE ALRRLGVDVD LVDVDASVLD RLTADPPDAV 
FIAMHGSEGE DGALRELLDL AGVPYVGATA AGARLAFDKT VAKAVLQAAG VAAPRSIAFS
QTAIRDLGGH QLLDRCVRRL GLPLVVKPAR GGSALGVTIV REATAFAHAL VTCFAYDTVA
LVEQYVVGTE LAISVVEDDD GTPRALPPVE IRPVDGMFDY AARYTAGMTE YHVPARITET
ARDRAVDVAL RAHQALGLRD LSRTDVIVTA DDEVLYLETN VAPGMTPTSL LPMAAAEVGI
DLGTLCRDLL VRAATRGPSE PGAVPSRSPQ ALR