Gene Acel_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1807 
Symbol 
ID4485706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2048733 
End bp2049791 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID639730597 
Productinner-membrane translocator 
Protein accessionYP_873565 
Protein GI117929014 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.607095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CGCTTGATAC CGCTTCACTC CAGCGCGAAC CGGGGGTTGT CCCGTCGACT 
CGGACCGCAT TCGTGCGGTT CCTGGGACGT CCCGAGACCG GCGCTCTCGC CGGCGCTATC
GCGGTCTACC TGTTCTTTTA CGCTCTCGCC CCGGCTTTCC GAGACGCCTC GTCGTTCGCC
AGTGTGCTCT ACGTCAGTTC GACGTTTGGA ATTCCGGCAG TCGCGGTGGC GCTCCTAATG
ATCGGCGGAG AATTCGACCT TTCCGCGGGG GTCGCAGTGA TCGCCGCCGC GCTCGCGGCA
TCAATGTTCA GCTACCAACT CAACACGAAC ATGTGGGTCG GCGTTCTGGT GTCGTTCGGC
ATCGCCATGG CGATCGGCTT CATCAACGGC TATCTCGTCG TAAAGACGGG AATACCGAGC
TTTCTCGTGA CGCTCGGCAC GTTCTTCATG ATTCAGGGCC TCAACCTAGC CGTGACGAAG
CTCATCACCG GCAATGTGGC GACGAGCGAC GTCTCAAACA TGCAAGGCTT TCACTCGGCG
CATGAGGTTT TCGCGTCGAC CATTACCGTC GGCGGCGTCG CACTGAAAGT GACGCTTTTC
TGGTGGATCG GCTTCGTGCT CGTGGGCACC TGGATACTTC GCCGTACCCG GGTCGGAAAC
TGGATCTTCG CTGTCGGCGG TTCCGCCACC AGCGCTCGGG CGGTGGGTGT GCCGGTCAAG
CAGGTGAAGG TCGGGCTCTT CATGGCGGTG AGTTTCCTGA CCTGGTTTAC CGGCATGCAC
CTGCTCTTCA ACTACAACAC GATCCAGTCG GGGAACGGTA TCGGCAATGA ATTCGTGTAC
ATCATCTCCG CGGTTGTCGG TAGCTGCTTG CTCACCGGCG GCTACGGTTC GGTGGTGGGA
GCTGCGATCG GCGCACTGAT CTTTGGCATG ACGAACCAAG GCATCGTGTA CGCCGGGTGG
AATCCGGACT GGTTCAAGTT CTTTCTCGGT GCGATCCTTC TTGCGGCGAT TCTGCTGAAC
AACTGGATCC GAGGCCGGAG CGAGGAGGCC AACCAATGA
 
Protein sequence
MSQTLDTASL QREPGVVPST RTAFVRFLGR PETGALAGAI AVYLFFYALA PAFRDASSFA 
SVLYVSSTFG IPAVAVALLM IGGEFDLSAG VAVIAAALAA SMFSYQLNTN MWVGVLVSFG
IAMAIGFING YLVVKTGIPS FLVTLGTFFM IQGLNLAVTK LITGNVATSD VSNMQGFHSA
HEVFASTITV GGVALKVTLF WWIGFVLVGT WILRRTRVGN WIFAVGGSAT SARAVGVPVK
QVKVGLFMAV SFLTWFTGMH LLFNYNTIQS GNGIGNEFVY IISAVVGSCL LTGGYGSVVG
AAIGALIFGM TNQGIVYAGW NPDWFKFFLG AILLAAILLN NWIRGRSEEA NQ