Gene Acel_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1602 
Symbol 
ID4484657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1802544 
End bp1803974 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content71% 
IMG OID639730388 
Productamidase 
Protein accessionYP_873360 
Protein GI117928809 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.270176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACC TGCACGACCT CTCAGCGTTC GAACAAGCTG CGGCGATTCG CCGGGGTGAC 
GTGTCGCCGT CCGAATTGGT CGATCACTAC TTGGCACGGA TCGAGCGGTG GAACGACACC
CTCGGTGCAT ATGTGACGGT CACGGCGGAG CTGGCACGTT CGCAAGCCGC GGCTGCGGAG
CGAACCCTGC GATCGGCGGA ACCGCAGAGC CTGCCGCCGC TCCTGGGGGT GCCGATTGCC
ATAAAGGACC TCACGGACGT CGCCGGAGTT CGCACGACGT TGGGTTCCGC GGTATTCGCC
GACCGGGTGC CGAGTACCGA CGCGCACGTC GTCGCATTGC TGCGGGCGGC TGGAACGGTT
CTTCTCGGTA AGACCAACAC GCCGGAATTC GGGCTGCCCT GCTACACCGA ATCGGATATC
GCGCCGCCAG CACGTTCCCC GTGGGATCCG CGGTATTCCG CCGGCGGGTC CAGCGGCGGA
TCAGCCGTCG CCGTGGCGGC CGGACTCGCG CCGTGGGCCC AGGGCAACGA CGGCGGCGGA
TCTGTGCGGA TTCCTGCGGC GGTCTGTGGA CTCGTGGGGC TGAAAGTGAG TCGCGGCCGG
GTGAGCAACG GGCCGGGGCC GGGTGACGTC AGCGGCCTGG CGTGGCACGG CCCGCTGACC
CGGACCGTCC GGGACGCGGC GCTCTGGCTG GACGCCGTCG CCGTCCCGAT GCCCGGCGAC
CCGTACTGGG CACCGCCGCT GCCGGGCGGT GACTCCTTTG TCGCAGCGAC CGACCGCGAG
CCCGGCCGGC TGCGGATCGC CCGGTACGCC ACCCCGGTGA TCATCGATGA GCCGGTGGAC
CCGGAGTGCC TCGACGCGTA CGAGCGGATC AGCACGCTCC TCGTCGACCT CGGTCACGAT
GTCGTCGACG TACCGGGGCC CGGTGACCCA GAGGTCGTCG CTGCGTTCGA GCGGGTCTGG
GCGGTGCTCG CCGCCGCCAC GGCCCTGCCG AGGGGCGCGG AATGGCGGGT GCGGCCGCTC
ACCCGGTGGC TGCGTGACCG GGGACGGCGG ATCAGCGGGC CGGAGTATGC CCGGGCCGTC
GCGACGCTGC ACCAGCGCAC CCGGGACATT GCCGTCGCCT GGCAGCAGTT CGACGCCGTC
CTGACACCGA CCCTCGCCCA TCCGGCGGTC GAGGTCGGGG CGCTGCGCGA CGACGAGGAT
CCGGCGGCTG ATTTCGAGAA TCAGAAGCGT TTCACGCCGT TCACGTCGCT GGCGAACATG
ACCGGTCAAC CGGCGATCAC TTTGCCGGTT GCGGTGAGCC GGGCGGGGCT GCCGATCGGC
GTCATGCTCA CCGGCCGGGC CGGTGACGAG GCGACCCTGC TCTCCCTGGC CGCACAAATA
GAGGCCGTCG TGCCGTGGAA CGCCGGGCGG CAGCCGGCGT GCTGGTCGTA A
 
Protein sequence
MADLHDLSAF EQAAAIRRGD VSPSELVDHY LARIERWNDT LGAYVTVTAE LARSQAAAAE 
RTLRSAEPQS LPPLLGVPIA IKDLTDVAGV RTTLGSAVFA DRVPSTDAHV VALLRAAGTV
LLGKTNTPEF GLPCYTESDI APPARSPWDP RYSAGGSSGG SAVAVAAGLA PWAQGNDGGG
SVRIPAAVCG LVGLKVSRGR VSNGPGPGDV SGLAWHGPLT RTVRDAALWL DAVAVPMPGD
PYWAPPLPGG DSFVAATDRE PGRLRIARYA TPVIIDEPVD PECLDAYERI STLLVDLGHD
VVDVPGPGDP EVVAAFERVW AVLAAATALP RGAEWRVRPL TRWLRDRGRR ISGPEYARAV
ATLHQRTRDI AVAWQQFDAV LTPTLAHPAV EVGALRDDED PAADFENQKR FTPFTSLANM
TGQPAITLPV AVSRAGLPIG VMLTGRAGDE ATLLSLAAQI EAVVPWNAGR QPACWS