Gene Acel_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1556 
Symbol 
ID4485352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1755413 
End bp1756348 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID639730340 
Productsignal peptidase I 
Protein accessionYP_873314 
Protein GI117928763 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.329256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0665058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAGCA GTCAACCGCC GGCATCCGGT GGCGGGCGGC TGACAGGGTT CAGTCAACGG 
CCGGCGTCGG ACCGACGTCG CCGACGGGCG GCGAAGAAGA ACCGGCTGCC GTGGTGGGCG
GAGACCGGGC TGCTGTTCGT GGTCGCCCTT GTCATTGCGG TGGTCGTTCA CACATTTTTC
TTTCAGGCCT TTTACATTCC GTCCGGGTCG ATGGAGAACA CCCTGCACGT CGGCGATCGC
GTCATCGTGA ACCTCCTTTC GTACAAGGTC GGTCACGTGC AGCGTGGGCA AATCATCGTC
TTCAACGGCG AGGATTCCTG GACGCCGGAG GTTTCCACAG CGACTCCGAG CAATCCGGTG
GCGCGTGTTA TTCGCGACAT CGGCGGTTTT CTCGGCTTTG CGCCCCCCGG GGAACGGGAT
TTCATCAAAC GGGTGATCGG TGTGCCGGGT GACCACATCC AGTGTTGCGA TGCGGTCGGG
CACCTGCTGG TGAACGGTGT TCCGCTGCAG GAGAACTACT TGTCGTCGGG CGAGCCGGCG
CAGCCCGCGA CGACGCAGGT GAATTTGAGC GGGCCGGGCA GCCGGTTCGA CATCGTCGTA
CCACCCGGGC GGGTCTGGGT GGAAGGTGAT CACCGGGACA ATTCCGCCGA TTCCCGAGCG
CATCGCGGCG ATCCCGGCGG CGGAACCATC CCAGAGAGCA AGATCATTGG CAGGGCGTTT
GTCGTCGTCT GGCCCCCGAG CCATTGGCGG CTGCTCTCGA TTCCGCCGGG CTATCACGCG
ATTCCGAATG CGGCTGCGGT GGCGGCTGGT GAGGTTCGGC CGATGCCGTC GGCACTGCCC
CTGGCCATCG GCGTCCTCGC GGTCACACCG GTCGGCGTCC TGCGGCTGCG GCGCCGATGC
GCGCATCCTC GGGTACACCG ACGGGGCAGC CGCTGA
 
Protein sequence
MSSSQPPASG GGRLTGFSQR PASDRRRRRA AKKNRLPWWA ETGLLFVVAL VIAVVVHTFF 
FQAFYIPSGS MENTLHVGDR VIVNLLSYKV GHVQRGQIIV FNGEDSWTPE VSTATPSNPV
ARVIRDIGGF LGFAPPGERD FIKRVIGVPG DHIQCCDAVG HLLVNGVPLQ ENYLSSGEPA
QPATTQVNLS GPGSRFDIVV PPGRVWVEGD HRDNSADSRA HRGDPGGGTI PESKIIGRAF
VVVWPPSHWR LLSIPPGYHA IPNAAAVAAG EVRPMPSALP LAIGVLAVTP VGVLRLRRRC
AHPRVHRRGS R