Gene Acel_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1387 
Symbol 
ID4486527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1545333 
End bp1546436 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID639730171 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_873145 
Protein GI117928594 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.246252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCGT TTCGTGGACA CGGATTTCCG CTTGCGGTCT GGACGAGTGG TCTTGCGGCC 
GCCAGCGGAG TAGCCGCGCT GATCGTCGTC ACGCTCGGTC TCGTCGCGGC TGATCGACTG
GACGCAGCAA GCTGGCTCGC GCTTGGTGTT GCGCTGGTCG TGACCGCGCT GTGCGCCTGG
GTCGGCTACC GGGCAGGGCG GCGGTTCGCG GTTGCCCTTC GGCATTTGCG GGAGAACGCC
ACGCATCGAC TGGAGGACGC CCACGCGCCG CTCGTCGGCG ACAGCAAGGA CCACGTTCTG
GTCAGCGCTG TTCCCGAGCT GCTGGAGTTG GCCCGGGCAT TGGAGGCGCT GCACCTGCGG
ATCCGGGTCT CGGACGACGT CGCGGCCCGC CACCGCCAGT TGGCCGAGAC GGCAAGTGCC
GGCATGTTCG AACTGCTCTC CGGCCTGGTG GAGGCGGAGG AATCCGCCCG AGGTCAGCTC
TCCGCCGAGC TGCATGACAC GGTGGCGCAG ACCCTGATGC TCGCGCGGTC GCTGCTCACC
TCGCCGGTGG TGGAGCCATC CGATCTTGTC ACGATCCGTG AGCTGGTCGC CGAGGCGGAG
GACCAAGTGC GCGCGGTGAT GGCCCGGACC CGACCACCCG CGCTCCGCGA CGGCGATCTC
GCGCAGGCGG TGCTTGCGCT CCGCGACGAC CTGCGCACGC GGTACGGGCT GGAGGTTCTC
ATCGAGTGGC CGAGTTCGCC GTACCCGCTG CCGTTGGTCA CCGCGGTGAC GGTGTACCGG
TTCTTCCAGG AGGGGCTGCT CAACGTCGTC AAGCATGCGG ACGTCGACAT CGCCCGGATC
TCGCTGACGG TTGACGAAAC CCACGTGGTC GCCGTGGTTC ACGACGACGG CCCGGGCTTC
GACCCGGAGC AGGTCCGGCC GGAGCGCGGC CGGCATGTCG GGCTTGGCTT GCTGCGGGAG
CGGGTCCGGC TGGCCGGCGG TTCGCTGGAC ATCACCTCGT GGCCGCAGCC CGGGACGACG
CTCACCCTGC GGATGCCGCG CGGGGCGCCG AGCGGGCCGC TTGCGCCGAG CAATCGGCGG
AGCGAGCCCG TGCCGTCGTC GTAA
 
Protein sequence
MKPFRGHGFP LAVWTSGLAA ASGVAALIVV TLGLVAADRL DAASWLALGV ALVVTALCAW 
VGYRAGRRFA VALRHLRENA THRLEDAHAP LVGDSKDHVL VSAVPELLEL ARALEALHLR
IRVSDDVAAR HRQLAETASA GMFELLSGLV EAEESARGQL SAELHDTVAQ TLMLARSLLT
SPVVEPSDLV TIRELVAEAE DQVRAVMART RPPALRDGDL AQAVLALRDD LRTRYGLEVL
IEWPSSPYPL PLVTAVTVYR FFQEGLLNVV KHADVDIARI SLTVDETHVV AVVHDDGPGF
DPEQVRPERG RHVGLGLLRE RVRLAGGSLD ITSWPQPGTT LTLRMPRGAP SGPLAPSNRR
SEPVPSS