Gene Acel_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1063 
Symbol 
ID4484845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1172283 
End bp1174127 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content69% 
IMG OID639729838 
ProductNa+/solute symporter 
Protein accessionYP_872822 
Protein GI117928271 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0264456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.304939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGC CGCTTGCAGC GGTAGCCGTG CTCGCCGTCG CGGTGGTGAC GGCGATTCTC 
GGCGTCCGTG GGCTGCGGGT GGCCCGCACG CCGGCTGACT TTCTCGTCGC GGCGCGCCAA
GTGCCGCCGC TCCTCAATGC CTCGGCGATC TCCGGCGAAT ACCTCTCGGC TGCTTCTTTC
CTCGGCATCG CCGGGCTGGC GATGTTCGAA GGCCTGGGCG CTTTGTGGTA TGCGGTCGGA
TACGCCGCCG GATACCTCGT GCTCCTTGTC GTCGTCGCCG CTCCGCTGCG CCGCTTCGGT
GCGTACACGA TCCCGGATTT CGCCGAGGGC CGGCTTGATT CTCCGCGGCT TCGGCGATAT
GCGACCGTTG TGGTGATCCT GATCAGCGGT TTCTACCTGC TGCCTCAACT GCGCGGCGCC
GGTCTCACCT TGCAAGATAT ATTCGGCGCC CCGTACTGGC TCGGCGTCAC CGTGGTCGGC
ACCGTCGTCA CCCTGGCCAT CGCCAGCGGC GGCATGCGCG GTATCACGAT CGTTCAGGCG
TTTCTCTTCT GGTTGAAACT CGCGGCGCTG GCCATCCCTG CGCTCCTCCT GCTCACGGTG
ATCCGCCATC CACCGCTCCA TGACGCGGTG CGGCCCGCGC CGCCGGTTTT CGCACGCACC
ACAAGTGTTC GCTTCCCCAC CACCGAGACC ATCATGGTCA CGACTCCGGT CACCGTCACC
GGCTCCGGCA CGGTCGACAG CACCTCACTC CACGGCGCGA GGCTGCTCGG CGCCGGCGCC
CACCGGATCG CCGCCGGCGC CGAACTCACC TTCCCGGCTG GAACCCCGGC ACCGGCCGTC
GCCGGCAACA CCACCCCCAC CGGCACGCAG TGGATGTCGC CGCTCATTCG CCTGAACGGC
CGGCTCATTC ATCCGCTCGC CGCCACCTAC GGCGTCATCA TCGCGACTTT TCTCGGCGCG
CTCGGATTGC CGCACATCCT GGTCCGCTTC TACACCAATC CCGACGGACA GGCCGCCCGG
CGCACCACCG CAATCGTCGT GCTGTTGGTT TCGTGCTTCT ATCTCCTGCC CGGCCTCTTT
GCGCTGCTCG GCCGGCTCAA CGCGCCCGGC CTGTATGCCA CCGGCCAGAC CGACGGCGTC
GTCCTCGTCC TGCCACGCGC TCAGGCGTCG GGGCTCGCCG GCGACCTTCT GGGGGCAGTG
ACAACCGCCG GGGCCGTCGC GGCGTTCCTC TCCACGTCGT CGGGCCTGCT CATCGCGATG
GCCGGTGCGA TCAGTCATGA CATTCTGCGG CGCGGCTCCC GGGCATTTCG GCTCGCCGCA
TGCGGTTCCG GGATCGCCGT CACCATCGGT GGTCTGGGCG TAGGCAGCTT CTCCATCAAC
GTGCTCGTCG GTTGGGCGTT CGCCATCGCC GCATCCTCGT TCGGGCCGCT GCTCATCCTC
GGTATCTGGT GGCGGCGGCT CACCGGTCCG GGTGCCCTCG CGGGACTGCT CCTCGGCGGC
GGTACCGCGA CCGCCGCCAT CATCTCCGCA ATGGCGGGCC TCGGCCGGAC CGGATGGCCG
GCGGTGCTCC TCGCCGTCCC CGCCGTGTGG ACGGTGCCGA CCGCATTCCT GGCCATGGTC
GTGGTGTCCC GGCTCACCCC GCGGGCAATC CCGCGTGACG TCACAGCGAA ACTGCTCGCC
CTTCACCTCC CGGAGGGCGT CCGCGGTCCG GGACGGCGCC CCACGCCGGG CGGGGCCGGA
CCGGAGACTG TCCCGGCGCG GGCGTCGGTT GTTCCTCTCA CGCCTGAGCG GCCGTCATCG
CCTCCCGAAG GGAGAAGACG CCCGCGTACA ACGCTTTTCC GATGA
 
Protein sequence
MNEPLAAVAV LAVAVVTAIL GVRGLRVART PADFLVAARQ VPPLLNASAI SGEYLSAASF 
LGIAGLAMFE GLGALWYAVG YAAGYLVLLV VVAAPLRRFG AYTIPDFAEG RLDSPRLRRY
ATVVVILISG FYLLPQLRGA GLTLQDIFGA PYWLGVTVVG TVVTLAIASG GMRGITIVQA
FLFWLKLAAL AIPALLLLTV IRHPPLHDAV RPAPPVFART TSVRFPTTET IMVTTPVTVT
GSGTVDSTSL HGARLLGAGA HRIAAGAELT FPAGTPAPAV AGNTTPTGTQ WMSPLIRLNG
RLIHPLAATY GVIIATFLGA LGLPHILVRF YTNPDGQAAR RTTAIVVLLV SCFYLLPGLF
ALLGRLNAPG LYATGQTDGV VLVLPRAQAS GLAGDLLGAV TTAGAVAAFL STSSGLLIAM
AGAISHDILR RGSRAFRLAA CGSGIAVTIG GLGVGSFSIN VLVGWAFAIA ASSFGPLLIL
GIWWRRLTGP GALAGLLLGG GTATAAIISA MAGLGRTGWP AVLLAVPAVW TVPTAFLAMV
VVSRLTPRAI PRDVTAKLLA LHLPEGVRGP GRRPTPGGAG PETVPARASV VPLTPERPSS
PPEGRRRPRT TLFR