Gene Acel_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0956 
Symbol 
ID4485751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1051845 
End bp1052687 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID639729731 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_872715 
Protein GI117928164 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.137087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGGTA GCGCACTGCC CGCAAGGCAC GATGGCGGTA CGGCGAAAAC TGCCCACCGG 
CGACGTTCGG TTGTTGTCCG CATTGGCCTG CTTGTCGCGC TGGTTGGGTT GACGAGCGGG
TGCACGGCGA ACGACCTGCC GAGGCTCGGC ATGCCGACAC CGATCACCGC GCAGGCGCAA
CGGGTGTTGC GGCTCTGGCA AGGCGGTTGG GCGGCGGCGC TCTTTGTAGG CTGCATCGTC
TGGGGGCTCA TCATCTGGTG CGTTATCGCC TACCGCAAAC GGGACGGCGC ACAGGCTCCA
CAGACGACGT ACAACGTGCC GATTGAGGTG CTCTACACGG TCGTCCCGGT CATCTTCGTC
GCTGTTTTCT TCTACTTCAC CGCCCGGGAC GAGAACTACG TCACGAAGTT GTCAGCCCAT
CCCGACGTGA CGGTCGAGGT CGTCGGCTAC CAGTGGGATT GGCAGTTCAA CTACTTGAGC
GGGCCGCAAC CCGATGCGCC GATTGTGGCT CAGGTGACCG GTGATGCTGC GCATGGACAT
CCGGCGACGC TTGAACTGCC GGCCGGCGAG ACGGTCCGGT TCAAGCTCGT CTCGCCGGAC
GTGATTCACG CCTTCTGGGT GCCGAATTTC CTGTTCAAGC GGGACGTCAT TCCGGGTCGG
ATGAGCGAAT TCGACGTCCA TATCGACGCG GACAAGCAAG GCACCTACAT CGGCCGGTGC
ACCGAGCTCT GCGGCCTCTA CCACGACCAG ATGATCTTCT ATGTCAAGGT GGTGGATCCG
GTGACATACC AGCATGACCT TGAGACGATG AAAGCGCAGT ACGCCGCCGG AGGTGCGTCA
TGA
 
Protein sequence
MRGSALPARH DGGTAKTAHR RRSVVVRIGL LVALVGLTSG CTANDLPRLG MPTPITAQAQ 
RVLRLWQGGW AAALFVGCIV WGLIIWCVIA YRKRDGAQAP QTTYNVPIEV LYTVVPVIFV
AVFFYFTARD ENYVTKLSAH PDVTVEVVGY QWDWQFNYLS GPQPDAPIVA QVTGDAAHGH
PATLELPAGE TVRFKLVSPD VIHAFWVPNF LFKRDVIPGR MSEFDVHIDA DKQGTYIGRC
TELCGLYHDQ MIFYVKVVDP VTYQHDLETM KAQYAAGGAS