Gene Acel_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0907 
Symbol 
ID4485813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1001379 
End bp1002257 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID639729682 
Productinner-membrane translocator 
Protein accessionYP_872666 
Protein GI117928115 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.794087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACA TCATCGAAGC AGTAATCCTT GGTGTCCTGA CGGGCGGGGT TTACGCCCTG 
ATGGCGTCGG GTCAGACTCT GATCTTCGGC GTCATGCGGG TGATAAACCT CGCCCAAGGG
GCGCTGGTCG TGGTCGCGGC GTTCCTCGCT TACACCCTCT TCGGCCGCTT CCACATTGAT
CCGTTCCTGG CGATCCTCAT CACCACCCCG ATTCTCTTCC TCATCGGCGT GGCCATTCAG
TGGCTCTTTC TCCGTCCGCT TCGCGCTGAC GATCTCGCTG AGATGTCACT TCTGGTCACG
TTCGCCGTCG CACTCGGCCT GGAGGGAATC CTCACCCTCG TGTACAAGAC CGATTACCGG
TCGATCAAAC CGGTATATGC CAATGATTCG TTCGTCGTGC TCGGTTATCG CATAACCACC
GTGCGGCTTT ACGCGTTTCT CCTTTCCTTG GCGGCCCTTG GCGTGCTCTA TCTCGTCCTG
TACCGTACCC GACTCGGCCG TGCGCTCCGG GCGACCGTGC AGAACCCCAC CGCAGCGCAG
CTGCTCGGAG TCGAGGCGAA ACGGGTGAGT GCGATGGGCT TCGGATTGGG CGCCGCAACG
GCGGCCGCCG CGGGATCGGT TTTCGGTGTC GTCTATCCCT TCAACCCGAA TAGTCACTAC
GACCTGATTT CCCGACTGCT GTCGATCGTC ATCCTGGGTG GTCTCGGCAG CGTCGGCGGC
GCCGTGCTCG GCGCAGTCGT CATGGGGGTC GTGTCGAGCG TTGTCGCGGT GGTCGCATCG
CCGACTTGGG CCGATTTCAG CTTTTTCGTT GTGCTCATCG CTGTTCTCCT GGTGCGGCCG
CAGGGCTTCT TCGGGATGCG ACTCCGAGGT GCGGCATGA
 
Protein sequence
MHDIIEAVIL GVLTGGVYAL MASGQTLIFG VMRVINLAQG ALVVVAAFLA YTLFGRFHID 
PFLAILITTP ILFLIGVAIQ WLFLRPLRAD DLAEMSLLVT FAVALGLEGI LTLVYKTDYR
SIKPVYANDS FVVLGYRITT VRLYAFLLSL AALGVLYLVL YRTRLGRALR ATVQNPTAAQ
LLGVEAKRVS AMGFGLGAAT AAAAGSVFGV VYPFNPNSHY DLISRLLSIV ILGGLGSVGG
AVLGAVVMGV VSSVVAVVAS PTWADFSFFV VLIAVLLVRP QGFFGMRLRG AA