Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0634 |
Symbol | |
ID | 4485540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 688429 |
End bp | 689202 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639729402 |
Product | LmbE family protein |
Protein accession | YP_872393 |
Protein GI | 117927842 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0198717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0139118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCC TCGCCATTGG GGCGCACCCC GATGACATCG AACTGGGCTG CGCCGGCGCC CTCCTTCGAC ATGTCGCGGT CGGTGACAAG GTCACCCTGC TCGTGATGAC CACCGGCGAG CGGGGGCCGC AGGACTCCGT CTCGCGTGTC CTCGAACAGG AGAATGCCGC GGCGCGCCTC GGGGCCGAGC TGATTTGGGG CGGTTTCCCG GACGGCGCGA TCCCGCACAG CCGAGAGACG GTGACCTTCA TCGACTCCGT CATTGCCGCC GTCGGCGCGG AGGTGCTCTA CACGCACGGT CAGCACGACA CCCATCAAGA CCACGTGGCG ACCGCCCTCT GTTCGCTCTC CGCCGCGCGG CGCCTCAACC GGGTGCTCTG CTACCAATCG CCGTCCGCCA CCGCGTTCAA CCCGGTCGTC TACGTCGACA TCGAAGACAC CTTGCGGGGC AAGCTCGAGG CGCTCGCTTG TCACCGCTCG CAGGTCGAGC GGTGCGAGCT CGTTGATCTA GAAGCGGTCG AGGCCGGCGC CCGGTTCTGG GGTCATCAAG CCCGGATGCG GTACGCCGAG GCGTTCGAGG TGCCCCGGTT CGTCTGGGAC ATCACCGGTG GCGCGTCGGC GGTACGCCGG CTCGAGAGCG CAGCGGCGGC CGGTGAGGCG GCCGCTGATC GGGTCGGCGT CCGGGACTTC GAGCTTGTCG ACGGCGGCGG TGCGGGCGAG CCTGTCCGGC GTACCGGGAC ATCGGTGTAC CTGGTGGGTG GCCGCCGTCC GTGA
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Protein sequence | MNVLAIGAHP DDIELGCAGA LLRHVAVGDK VTLLVMTTGE RGPQDSVSRV LEQENAAARL GAELIWGGFP DGAIPHSRET VTFIDSVIAA VGAEVLYTHG QHDTHQDHVA TALCSLSAAR RLNRVLCYQS PSATAFNPVV YVDIEDTLRG KLEALACHRS QVERCELVDL EAVEAGARFW GHQARMRYAE AFEVPRFVWD ITGGASAVRR LESAAAAGEA AADRVGVRDF ELVDGGGAGE PVRRTGTSVY LVGGRRP
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