Gene Acel_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0627 
Symbol 
ID4485533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp678624 
End bp679115 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID639729395 
Productresponse regulator receiver protein 
Protein accessionYP_872386 
Protein GI117927835 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.143116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00307044 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATCGTCG ACGATGACGA AGCGATCCGC CGGCTCATGC GAGTCAATCT CGAACTTGAG 
GGGTTCCAGG TCGACGAGGC GCCGGACGGC GAACGCTGCC TGGCCGCGAT CCACCAGCTG
CGACCCGATC TCGTCGTCCT TGACGTGGCC ATGCCGGGAA TCGACGGCCT GTCGGTTGCG
CGAACGCTCC GAGCCGATCC CGCCGTCGCA GAGGTAAAGA TTCTCATGGT GTCGGCCCTG
GCCCGATCCG AGGACGTCGA GCGAGGCCGG CTCGCCGGTG CCGATGCCTA CCTCACCAAA
CCGTTCGAAC CCGACGCCTT CGTCCAGCTG ATCCGTACTT TGCTGGCCGC TGACCGCCCG
GCGGACGACG CGACGGATCC CGAACGCCAC ACTGACGCGA CGGATCCCGG CCGCCACACC
GGCGCGGCGA GTGCCGAACC CCGCCCGGCG GACGCCGCCG CGGATCCCGA ACGCCACACC
GCGGCCGGGT GA
 
Protein sequence
MIVDDDEAIR RLMRVNLELE GFQVDEAPDG ERCLAAIHQL RPDLVVLDVA MPGIDGLSVA 
RTLRADPAVA EVKILMVSAL ARSEDVERGR LAGADAYLTK PFEPDAFVQL IRTLLAADRP
ADDATDPERH TDATDPGRHT GAASAEPRPA DAAADPERHT AAG