Gene Acel_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0107 
Symbol 
ID4484550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp110309 
End bp111754 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID639728870 
Productmajor facilitator transporter 
Protein accessionYP_871869 
Protein GI117927318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCC TCCGCCACCG CCCAGCCGCG CGGCTCTCCC GCGCCGCCGC CGCGGCAGCC 
GGTGGACTGC GACGCATCGG CACCGGCGTG GCGCGGGCGG CGTCCTTTGT CGGCACCCAT
TTTTATCGAG CGACCCGGGC GGACGGCGCG GGGCGCAGTG GACTTGCGAA CCTCATCGAC
CTCCACACCA TTCACAGCCT GGGCGACGCC ATGCTCACAG TGGCGCTCGC CAACACGCTC
TTTTTCGCCG TCGACGTCCA TCAAGCGCGC AGCCGGGTGG CGCTCTACCT TGTCATCACG
ATGGCGCCGT TTGCCGTGGT TGCGCCGATT GTTGGGCCAA TTCTGGACCG ATTCCGGCAC
GGCAGACGCA TGGCGTTGGC GACGACCCAA ATCGTCCGCG CTTTCCTTGC CTGGGTCATC
GCTGACGCGG TAGCCACCAA AGGTGGATTC GCGTTGTATC CAGCGGCATT CGGAGTTCTG
GTCTGTTCCA AGGCCTACGG CGTGTCGCGT TCCGCAGTCG TACCGAGGCT GCTGCCCCCG
GACCTCACTT TGGTCCGCGC AAACGCCCGG CTCATCCTCT GGGGAATTAT CGGTGCAACC
GTCGGGGCGC CGATCGGGCA GGCACTCAAC TGGATGACAG GATCGCCGTC GACCACGCTG
CGCATCGCCA CGCTGGTGTA CTTTGCCGGC GCATTCTTCG CGTTCCGTCT GCCCCCGCGA
GTCGACGTCC CTGCAGGGGA AATGCCGGTG CGAGCCCGCA CCCCGCGGGA GAACCGGCAG
CGCACTTTCT ATCACCGTAT TTTCCCGCCG CTGCGCGGTG TGGGACCGCG CATGCCGGTC
ATGCTCCGCG CAAACGCCGG ACTTCGCATC TTCGCCGGAT TTCTCACGTT GTTTCTCGCT
TTCCTCATCC GGACCCACCC GCTCGGGGTC TTCAGCGAGA ACGTCGACCT GGGGATCATC
GTGGCGGCTG CCGCGATCGG CAGCTTCATC GGCACCTTCC TCGGCGGTTG GCTGAAGGGG
CGCCATCCCG AGCCGCTGGT CGTCGCGTCG CTCCTCGCGG CGGGAATCGT CGGCATTCTC
AGCGCGGTCT GGTTCGGTCT GGCCACCGCG GCGATCGCCC TCCTTGTCGC CGACCTCTGT
CAGTCGTTGG CGAAGCTGGG ACTCGATTCC GTCATCCAAC GCGACGTGCT GGAAGCCGTC
CGGACCTCGG CGTTCGCCCG GTCGGAGACC GTACTGCAGT TGTCCTGGGT GACCGGTGGA
TTTCTCGCTC TCGTCCTGCC GTCCAACGGC ACGCTCGGTC TGGCCCTGGG ATCGGCGATC
GTGGCGGTGT TCTTCCTTGC CACCGTGACC CGACTGCGGG TCAGCGTCGA AACCGGGCTG
CAGGCGTTGC GAGCGCAGCG GCTCCACGCA CCGGCACGAA CCGCCGACGA AAGCCCCCGC
CGATGA
 
Protein sequence
MTILRHRPAA RLSRAAAAAA GGLRRIGTGV ARAASFVGTH FYRATRADGA GRSGLANLID 
LHTIHSLGDA MLTVALANTL FFAVDVHQAR SRVALYLVIT MAPFAVVAPI VGPILDRFRH
GRRMALATTQ IVRAFLAWVI ADAVATKGGF ALYPAAFGVL VCSKAYGVSR SAVVPRLLPP
DLTLVRANAR LILWGIIGAT VGAPIGQALN WMTGSPSTTL RIATLVYFAG AFFAFRLPPR
VDVPAGEMPV RARTPRENRQ RTFYHRIFPP LRGVGPRMPV MLRANAGLRI FAGFLTLFLA
FLIRTHPLGV FSENVDLGII VAAAAIGSFI GTFLGGWLKG RHPEPLVVAS LLAAGIVGIL
SAVWFGLATA AIALLVADLC QSLAKLGLDS VIQRDVLEAV RTSAFARSET VLQLSWVTGG
FLALVLPSNG TLGLALGSAI VAVFFLATVT RLRVSVETGL QALRAQRLHA PARTADESPR
R