Gene Aboo_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1310 
Symbol 
ID8828272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand- 
Start bp1253849 
End bp1254592 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content31% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003483680 
Protein GI289596984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.251322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGA GTTATAGTGC ATATATGTCT TATAAAACTT GTCCTCGAAA ATATTATTAT 
GAGAGGGTAT ATCCTATCCC ACAGTTAAGG TATGCGGATT CTGAAGTGGG AAATTACCTG 
CACAACTATT TTTACTCAGT TTTAAATGGG GAAAATGAAA GTGTGGATGC GGATAAAATT 
TGGGAGAAAA TTAAAGGAGA ATCTATCTTA ATTTCTGCAA AAGAAATAAA AGATGATTTT 
CAGGATTTTG ATGATATGGT TGCCTACTAT TCCTCACTCT CAGATAAAAT AATCTTGTGG 
AGAGATGAGA AAGATTATGT GAATAAGATA AAAATGGGAA TAGAGAATTC CATCAAAATA 
GCCAAGGCAC TTAATTTGAA AAGTTTCAAT GTAGAAAAAT GGATGAATGC AAAGATTGAT 
GACTTGCTTA TTTATGGAAG GTTTGACATT ATAAGTGAGA ACGATATTTT TGAATTAAAA 
ACAGGGGGAG AAAGGGAGGA TTATTATTTG CAACTTGCAT TTTACGCCTT GATATTCTAC 
TTAAAGAATT ATATCATTCC TCGTGGGAGA TTGGTGTATC TCCAAAATGG GAAAATAATT 
GATGTGAAGT TCAATTTCAA TGTATTAAAT GAGATTATGG AAGATGTGAT AAAAGTGGGT 
AAAGGAATAA AAAATGAAGA TTTTCCTGCA AACAAGGGTG AAAATTGTAG ATTTTGCCCT 
TATAAATTCA TCTGTGATTA TTAG
 
Protein sequence
MKLSYSAYMS YKTCPRKYYY ERVYPIPQLR YADSEVGNYL HNYFYSVLNG ENESVDADKI 
WEKIKGESIL ISAKEIKDDF QDFDDMVAYY SSLSDKIILW RDEKDYVNKI KMGIENSIKI 
AKALNLKSFN VEKWMNAKID DLLIYGRFDI ISENDIFELK TGGEREDYYL QLAFYALIFY 
LKNYIIPRGR LVYLQNGKII DVKFNFNVLN EIMEDVIKVG KGIKNEDFPA NKGENCRFCP 
YKFICDY