| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1220 |
|---|
| Symbol | |
|---|
| ID | 8828182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1165019 |
|---|
| End bp | 1166365 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | TIP49 domain protein |
|---|
| Protein accession | YP_003483590 |
|---|
| Protein GI | 289596894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.478544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAT CCGAGATGAG GGAGTGGGAA AGAATATCTG CGCATTCTCA CATTCTTGGA
CTGGGGCTTG ATGAGAATTA CAGGGCTTTG AGAAAAGCGG ATGGTATGAT AGGACAGATA
GAGGCAAGAG AGGCAGCGGG TATAATTGTC AAGATGATTA AAGAGGGTAA ATTTGCAGGT
AATGCCATTC TAATTGCAGG CCCTCCGGGA AGTGGCAAAA CTGCCCTTGC CATAGGAATT
GCAAAAGAGC TTGGTGAGGA TGTACCCTTC GTGCACATCG CTGGCAGTGA GATTTATAGC
AGTGAGGTGA AAAAGACGGA ATTCTTAACT CAGACATTGC GTAAGGCGAT AGGGGTGAGA
ATTCACGAAA TGCGCAATAT ATATGAGGGA AAGGTTGAGA GTTTGAGTGT GGAGTATATG
CAGCATCCTT ACAATCCGTA TCAGAAGATT CCTGCAACCG CAACAATTAC GCTTAAAACA
AAAAATGAGA AGAAAAAACT AAAAATGGAT CAAAGCTTTG CTATGCAGTT ATTGCAGCAG
GGAATTGAAG AGGGCGATAT TATTCAGATT GATGCAGATA GTGGAAGAGT AGTGAAAATA
GGCATTTCCA AAGATGCTGT GGAGGAGAAA AGCTACGATT TGTCCTCTGA GAAGATTATG
GATATCCCAG ATGGCTCCGT GCTGAAAGAA AAAGAATTTG TCTATACCCT AACTCTCAAC
GATTTGGACA TGATGCAGTC CCGCTCTGGA ATGGATTTAG CATCTTTGCT ATTTGGTGCC
TCTGAAAGAA AAGAGATAAG CGAGGATGTC AGAAGAAGAG TGGATGAACA GGTAAAGAGG
TTAGTGGAAG ATGGAAGAGC AGAATTAATC CCAGGAGTTC TGTTCATTGA TGAATGCTCA
ATGTTAGATA TAGAAACATA CGCTTTTCTA AATAAGGCCA TGGAGCAGGA GCTCTCTCCT
ATTATCATAT TCGCAACCAA TAGAGGAATA ACAACTGTAC GCGGTACTGA TATAAAATCA
CCGTTTGGTA TGCCTCTGGA CCTGCTGGAT AGATTATTGG TCATAACAAC GAAGAAATAC
GATGCGGAGG ATATGAAGGA GATCATAATG ACAAGAGCTA AAAAAGAAGG GATAAAAATA
GAGAAAGATG CAATGGAATA TCTTGTAGAG ATAGGCCAGA AAGCTTCTTT GAGGTACGCA
ATACAGCTCT TGGCTCCAGC GTGGGAGCTT GCAAATAAGG AAGAGATAAA GAGAGAGCAC
ATAGAGAGAG TATACAAGCT CTTTGCAGAT GTAAAACGCT CAGTGAACTA CCTGCGCAAG
ATGGAAGAAG AAATGATTTA TGACTAA
|
|---|
| Protein sequence | MEISEMREWE RISAHSHILG LGLDENYRAL RKADGMIGQI EAREAAGIIV KMIKEGKFAG
NAILIAGPPG SGKTALAIGI AKELGEDVPF VHIAGSEIYS SEVKKTEFLT QTLRKAIGVR
IHEMRNIYEG KVESLSVEYM QHPYNPYQKI PATATITLKT KNEKKKLKMD QSFAMQLLQQ
GIEEGDIIQI DADSGRVVKI GISKDAVEEK SYDLSSEKIM DIPDGSVLKE KEFVYTLTLN
DLDMMQSRSG MDLASLLFGA SERKEISEDV RRRVDEQVKR LVEDGRAELI PGVLFIDECS
MLDIETYAFL NKAMEQELSP IIIFATNRGI TTVRGTDIKS PFGMPLDLLD RLLVITTKKY
DAEDMKEIIM TRAKKEGIKI EKDAMEYLVE IGQKASLRYA IQLLAPAWEL ANKEEIKREH
IERVYKLFAD VKRSVNYLRK MEEEMIYD
|
|---|
| |