| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0772 |
|---|
| Symbol | |
|---|
| ID | 8827722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 730748 |
|---|
| End bp | 731809 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003483143 |
|---|
| Protein GI | 289596447 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00827536 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTCT TACCACTGGG TGCTGCTACG AATAAACCGG TTGTACGAGG TTGTAAACTT
TGTGAAGAAG GGGCAAAGAT GGTTCTTTTC GTAACGGGTA TATGCCATGC CGGGTGCTTC
TACTGCCCTC TCAGCAAGGA GAAGATGAAT AGGGATGTCA TTTTTGCAGA TGAAATGCCC
GTGCATAGCG ATGAGGATGT TCTTTTGGAG GCAAGATTGA TAGATTCGAA GGGAACAGGA
ATAACAGGCG GAGATCCCAT GGAGATGGTT GATAGAGTTA TTCACTATAT TCATCTTCTC
AAGGATAATT TCGGAGAAGA GCACCACATA CACCTTTATA CTGCTTCAGG AAGCAAAGAG
AAAATAGAGA AATTGGCAGA TGCAGGCTTA GATGAGATTC GCTTTCATCC ACCTCCTCAA
TTATGGACAA AAATGCAGGG AAGCATATAC GAGAAGCGCT TAAATTGGGC AATTGAAAGT
AGAATGGATA CGGGAATTGA AGTACCCGTG CTTCCTGATA TGAAAGATGA GCTTATTGCG
TTGGTAAAAT TTGCAAACGA TATGGGCGTT TTTGTAAATC TAAACGAGCT TGAATTCTCT
GAAACAAATT ATAGGGAGCT AAATATGCGC GGTTATGAGC CAAAGAATGA TATTTCCTCC
GCAGTGAAAG GAAGCGAAGA AGTTGCCTAT GAGGTTGTTG GTATGGACTG GGACATAGTA
GTGCATTACT GCTCTTCTGC CTTCAAGGAT GGAATACAAA TGCGCAGAAG GCTTATGAGA
AGAGCAAAGA ATATAAAGAA GGATTATGAG GAAATCACGG AGGATGCCAC TTTGATTTTA
GGGATAATCG AGGGAAAAAA TTTACAAGAA ATATACCAAT ATTTGAAGGA TAGGTACAAT
ATTCCTGATA ACTTAATCTC TATAAATTCT CAACGCAATA GGGTTGAAAT CTCCCCCTAC
ATTCTCGAGG ATATTGCTGG GGAACTGCCA TGGGATGCAT ACGAAGTTGA AGAATATCCA
ACTTGGGATA AGTTGCAGGT TGAAAGGATA AAATTGAACT GA
|
|---|
| Protein sequence | MILLPLGAAT NKPVVRGCKL CEEGAKMVLF VTGICHAGCF YCPLSKEKMN RDVIFADEMP
VHSDEDVLLE ARLIDSKGTG ITGGDPMEMV DRVIHYIHLL KDNFGEEHHI HLYTASGSKE
KIEKLADAGL DEIRFHPPPQ LWTKMQGSIY EKRLNWAIES RMDTGIEVPV LPDMKDELIA
LVKFANDMGV FVNLNELEFS ETNYRELNMR GYEPKNDISS AVKGSEEVAY EVVGMDWDIV
VHYCSSAFKD GIQMRRRLMR RAKNIKKDYE EITEDATLIL GIIEGKNLQE IYQYLKDRYN
IPDNLISINS QRNRVEISPY ILEDIAGELP WDAYEVEEYP TWDKLQVERI KLN
|
|---|
| |