Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0573 |
Symbol | |
ID | 8827518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 551954 |
End bp | 555208 |
Gene Length | 3255 bp |
Protein Length | 1084 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | PKD domain containing protein |
Protein accession | YP_003482946 |
Protein GI | 289596250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.179888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTTA GAATGGTGGA AACTGTCAAG ATAAAAGCGG TGGTAATTCT ATCAATCCTC GTTATTGCTA TAGGCATTCC CGCCATATAT TATGCTTCAA CAGAAAGGCA ACCTACAAAC AATCCTCCCG TGGCCATAAT AACCGCCCCG TCTAGGGGAT ATACGGATAC TCCCATAGAA TTTTCCGCAG CTAATTCTAT TGATGATGGT TTTATTCTAA CTTACATTTG GGATTTTGGA GACGGAACAA AATCTGCCGG TAAGATTGTG TATCACACTT ACAGAGAAGA GGGGAACTAT ACCGTTACTT TGGTGGTATA TGATAATGAG GGAGCATACT CCTATGCAAA GAAAATGATC ACCATTGAGA AAAAGCAAGT CAAGGAAATT AAGGTATCAG TTAATGAATT ATTAAAGAAT GTTTCTGCTT ACATAGGTAA GGAAGTTGTT GTGGATGGTA TATTTGGATA TGGACGCAAT TACAGTTTCT TCCTTGTAAA TAATTCAGGG TACAGAGGTA TAAGGGTTTA TGTAGAACCT GGAGCTCAAA GGCCAGAAAC TATGCATTAT GGAGATATCT TGGAAGTTCG TGCAAGATTT ACAGTTTATA GAAATGAATT CGAGTTGAAA GTTGAGAACA ATAGCAAGGA TTATGTGAAA ATAATAGGGT CTGGTGGAAA GAACACTTAT GCTAATATAA CCCTTCAAAA TTGGCAAGAA TACAACAATT CATTTATCCA TCTAACGGGT AAGGTAACAA AGGTTTATGC CTCTTATAGA TATTCCATAG GTCCCTTAAC TGTTTACATA TCCTTCAATG CCAACCGTAC TGGGTCTCCT GCAGTAGGGG ATGTTTTTGA AGTTCAAGGA TTTTTAACTT ATTATCGTTC TTACAAGTAC AATGTGAGCT ATATGGAAAT TTATGTGCGC AACTCCACGG CTGATTTCTC CAAATATGTA AAATCTACCT ATCAAAATGT GTCTATGAAC TCTTTGCTTG AAGAACCAGA TACTTACAAT AACTCTGCCG TGCATATTCC ATCAGCATTT GTCATATCTT CCTACGCTTC TTGGAATTTT GAGGTGAGCG ATAACATAAG CAATAATGCA TCTATGCATG TTTATGTTGA AAGAGGAGGT ATTGTCAAGG GAATGATATT TAATGGCGCA AAGGTAGAAA TATGGGGAAA TTTAGTGCTC TATCGTGGGC AGTGGGAGAT AAAAATTAGA AATGCTACAA CTGATAAGGT TTTAGTTTTG AGCAAGCCAG AATATAAGAA TATATCCGTA GATAAACTCC TTGGAAATCC ACAAGTTTAC AATGGAAGCA ATGTGCACTC TTGGGGAATA ATAAGTTGGT TATATCAGAA TGAGAGCTCT CATTTTACCC TCTTCGGGCT TTTCTGGAAT GGAAGCGAGG TAAAAGTTGT AGGATTCAAT GGTTCTAGTA TAGGGAGTAT TCAAGAGGGA TACTATGCAG ATGTTTATGG AGAATTCACC TCTTATAGGG GAGAATGGGA GATTAAAATC AGGCCCAAGA GCTATGATTA TGTTGTGGCA CATCCTCAAA GTTATAGAAC GACAAATATC ACTTCAATCC TTAAAGCTCC TGAAGATTAC AACAACACTT TAGTTTATGT GCCTTATGCG AAGGTTAAAA ATGTGTTTGC AAACTGGCTT TTCTGGGTTA GCAATAATGT TTCAAATCCT AATGATTTGT CAGTGTATGT TGAGCGTGGC GGGATTGTAA ATGGCACTCC TTATTTCAAC GCTACAGTGG AAATATGGGG TATGGTCACG CAGTACAATG GCTCATGGGA GCTGAAAATA AGAAACAATA CAGATGACAA AGTTGTTGTG ATTAGCAACG CAACATATAA AGAGGTATCA ATAACCACGC TCTTGAGCTC ACCTTTTAAG TATAACAATA CTTTGGTTTA TGTACCTGAG GCAACGGTGG TGAGTGTATA CAATGCCTCC TGGCTATTCT GGATAAGTAA TTCCACAAAT TCCACCGAGG ATGTTAGCGT ATATGTGGAA AAAGGAGCTC ATATAGATGC CCAGGTTTAT GTCGGAGCGA AGGTTGAAGT GTGGGGTATG GTTACCCGAT TTAATGGGAA ATGGGAGATA AAGATAAGGG CAAACTCTGG GGATAATGTC AAGCTCATAA CCCCAATTAG CAATTACACG GTGGTTAATA TAACAGAACT CTTGGAGAAT ACAAGCGCTT ATAATGGTAC CCTTGTGGAA ATACCAAATG CCACGGTGGT AAATGTATAC GCTTCTTGGT TATTCTGGGT AAGCAATTCC ACTGCGGATA TCAAGGATAT TGCAGTTTAT GCTGAGAAAG GTGTGAAAGT CCCAACCTTG GGCAAAGGTG ATACTGTCAA GATTTATGGA AATGTTACAT ATCATAATGG CTCATACGAG ATACTTTTGC GGACAGGTAC GCAAGATAAA GTCGTGGTTT TGCATTCCTC CGCTAAATAT GTGAATCTGT CCTATTTGCA CGAGGTGGAT AGCAATGGGA CTCTTATACA TCTAGGCGAG CAAGTTATCG TGAATGCAAC GGTTATTTCT TCTCCAGGGG TATTTTCGTT CACCTCAAGC AGTGGAAAGC CCATACTGAA AATGTATGTG GAAGATTCCA CGGGGGGTGT TTTGGTATTT GGTTATGATA TGGATTATGC AAAGTTGAAT TTAACGGAAG GAGATATGGT ACAGATTAGG GGTACAATAG CGCAGTATAA TGGGGAAGCA GAGCTTAAGA TATCATCTCT TAATTACATA ACTTATCTTA GAAAAGGGAC AGTACCAAGT CCTCTGGTCA TACCTACTGG GTATTTCTCC AATTGGAGCG CTGCAGAGAA GGTTGAGGGC ATGCTTGTAA AAGTTCACGG CACTGTCACA AGCGTAAACC AGAATTATGG ATATTTTTAT CTGGATGATG GGAGCGGTGC AGTAGAGATA TATGCAAAAG CAGCAGGCAT AGATATTTCA AATATTTCTC AGGGGGAGAA TCTAACGGTT ATAGGTGTAG TGTCTCAATA CGATAAGACA TCGCCTTACA CCAGTTATTA TGAGATATTG CCTAGATATG CATCGGATAT AATGCAGAAT AATACATCAT CGAAAGTTAG TGATAAAAAT TTTGTAGGAA ATTGGAAAGA TAGTGAATTT GGTACATACT TGGAAGAGGT GTATGTATGG AGGATAGATA CTGTCCTAAT TGCGGCAGAT ATGTGGGTTC ATTAG
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Protein sequence | MKVRMVETVK IKAVVILSIL VIAIGIPAIY YASTERQPTN NPPVAIITAP SRGYTDTPIE FSAANSIDDG FILTYIWDFG DGTKSAGKIV YHTYREEGNY TVTLVVYDNE GAYSYAKKMI TIEKKQVKEI KVSVNELLKN VSAYIGKEVV VDGIFGYGRN YSFFLVNNSG YRGIRVYVEP GAQRPETMHY GDILEVRARF TVYRNEFELK VENNSKDYVK IIGSGGKNTY ANITLQNWQE YNNSFIHLTG KVTKVYASYR YSIGPLTVYI SFNANRTGSP AVGDVFEVQG FLTYYRSYKY NVSYMEIYVR NSTADFSKYV KSTYQNVSMN SLLEEPDTYN NSAVHIPSAF VISSYASWNF EVSDNISNNA SMHVYVERGG IVKGMIFNGA KVEIWGNLVL YRGQWEIKIR NATTDKVLVL SKPEYKNISV DKLLGNPQVY NGSNVHSWGI ISWLYQNESS HFTLFGLFWN GSEVKVVGFN GSSIGSIQEG YYADVYGEFT SYRGEWEIKI RPKSYDYVVA HPQSYRTTNI TSILKAPEDY NNTLVYVPYA KVKNVFANWL FWVSNNVSNP NDLSVYVERG GIVNGTPYFN ATVEIWGMVT QYNGSWELKI RNNTDDKVVV ISNATYKEVS ITTLLSSPFK YNNTLVYVPE ATVVSVYNAS WLFWISNSTN STEDVSVYVE KGAHIDAQVY VGAKVEVWGM VTRFNGKWEI KIRANSGDNV KLITPISNYT VVNITELLEN TSAYNGTLVE IPNATVVNVY ASWLFWVSNS TADIKDIAVY AEKGVKVPTL GKGDTVKIYG NVTYHNGSYE ILLRTGTQDK VVVLHSSAKY VNLSYLHEVD SNGTLIHLGE QVIVNATVIS SPGVFSFTSS SGKPILKMYV EDSTGGVLVF GYDMDYAKLN LTEGDMVQIR GTIAQYNGEA ELKISSLNYI TYLRKGTVPS PLVIPTGYFS NWSAAEKVEG MLVKVHGTVT SVNQNYGYFY LDDGSGAVEI YAKAAGIDIS NISQGENLTV IGVVSQYDKT SPYTSYYEIL PRYASDIMQN NTSSKVSDKN FVGNWKDSEF GTYLEEVYVW RIDTVLIAAD MWVH
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