| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0392 |
|---|
| Symbol | |
|---|
| ID | 8827334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 386408 |
|---|
| End bp | 389311 |
|---|
| Gene Length | 2904 bp |
|---|
| Protein Length | 967 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_003482765 |
|---|
| Protein GI | 289596069 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAA AAAGAGGAAA GGTCACTGAA AGATCTTTAT ATCCAGCCAT TATAGATCTA
TTAAAAAAAA GAGGTGCCGA AGGAGTCGAG GAGATTAAAT ACGAATCTCA GCCAGATATA
ATCGCTGATT GGTTAGGAGC AAGATGGATT ATTAGCATAA AAATAGGGAA TTATACAAAA
AGTATGTTCT TTAAAAATGC CATGATACAA TATGCAAGGC ATATAATTGA TTCGGGTCTT
AAATATGGAA TGATTATATT TTTACCAGAG AGTATTAGAA ATATTTCTGT AGAAGAGAAA
GCTCTTTATA ATGCTATCAG AAATAAAAAA GCTTATGTTA TTTTAGATAC TCCTGAAACT
CAGAAAGAAT TTTTAGATAC CTTACCCAAT ATTTTTGAGG AAGTAGAAAG AATTTTAAAA
GAGAAAATCA AATCCACATA TAGTTTAAAA ACGGTAATTA CCCTTTTAAA AGAGCAAATC
AATGATATTA TGAAAGAGAC TAGAATTACA GAGAAGGAAA TGACCAATAT AATTACAAGT
GATGAATTGT TTCTTGGGAT TAGTGCATCA AAACATAAGG ATATAAAAGT AATAAAGTTT
ATTTCGACAT ATATTTTTTT AACACAGGTT CTATTTGCTA GGTTATACGG TGTAGAACAT
CCAGCAATTT TAAGCGGTTT TGATATTAGA AATATAACTA AAGAAGGTAT AAGAGAACTC
TTTAGACGAA TTACTGAGAT AAATTATAGA CCAATATATA AATTTGATAT ACTGGATACC
ATACCTGAAC ATTATATAAA AGATACTTTC ACTTTGATAT GGAATTTAAA GATAGAAAAT
ATTAGGTTTG AACTCCCAGG AAGATTATTT CATGAGCTTA TGCCAAAAGA AATTAAAAAA
ATGCTTGCTG CTTTTTATAC TAGACCAATA GCTGCAGAAA TTTTATCTTG TGTTACAATT
AACAATGCTG AAGAAGTCGT ATTTGATCCT GCTTGCGGTT CTGGTACGAT ACTGACTGCA
GCATATAGAA GAAAACGAGA ATTATGGAAT AAACAAGAAG ATCCTCACAA ACTCTTTTGT
GAAGAACAAA TTTATGGAAC AGATATAATG CCATTTGCCG TAAATCTAAC CACAGCTAAT
TTAGCATCTC TTAATCCTAA AATTACAATA GAAAAAATGA ACATAGCAAG AGCTGATAGT
CTTAAACTTG AACTAAACGT GCCTATTAAA AATGGTTTAT CTAAATTAGA AAGATATGGT
ATACCTATCT CATCTAATAT TAAAAGTAAG AATATGCAAG GTGATGAATA TGATATGGTT
CTAGACCTAA TGGATGTTGT TCTAATGAAT CCCCCATTTA CAAAAATTGA AAGGGGAGTA
AAGAAATATA TAAAAATAGA GCGTTTCAAA TCACGAGTTG GAGGAGAAAT AGGATTATGG
GGGCATTTTA TAGCTTTGGC AGATATGATT CTTAAGCCAA ATGGTATGTT TGGAGGGGTT
ATTCCTATTA ATATATTGAG GGGAAGAGAA AGTGAAAAAG TAAGAAAAAT AGTTTTTGAA
GAGTGGTTAC CTCTATATGT AATAAAATCA ACAATGAATT ATGGTTTTTC TGAATCTTCT
GAATATAGAG ACATTCTAAT AATAGCTAAA AAAACCAAAT CAAAACCTAT TAATCATAAA
GTTAAGTTTG TTTTAATTAA AAAAGATCTA AATTCATTAA GCTTTAAAGA TGTTAAGCGG
ATATGTGATA GGATTAAAAC CTCATCAAAG TTAAATGACC CTCTACTAGA AATAAGATCG
TATTCTATGG AAGATATAAA AAAGCATTTT GTTAATATGA TGTGGTTTAT TAGTGGGTCA
TCTTTTGAAT GGAAAGATAA TCTTTTAAAC ATAATAAGAA AATCCGAAAT GGTGTTAGAT
TATTTCCCAC ATAGTGGTAA TGGATATTTT ATGGAAGGAT ATAGACCCGT ACCAAAAGGT
GTTTCTAAAT TCATGTTTAT TACAAGACCT ATTAATGAAA ATAGGATCGA TAAAGCCTTT
TTAGTTCTCA TCAAAGAAGA TGATAAAAAA ATATTCGCTG AAACAAAAAT GATGTATGAA
ATGAGTAAAC TCAATGAACA TTCAAAGAGT AGCATTTTCG ATTTTGATAA AGATAAGTTT
TTACTCACTA TTAGAACACC CGTTGGATTG AATACAATGG ATATTACAAA TAAACATGAT
TATATTGCTA TATCTCCTTA TAAGGACATA GAAAAAATCC AGAGACTTTC AGGATTTAAT
AGTTCATTAA AAAATAGTTA TTGGAATAAT ATTAAAAAAC AAATGAATAA TATAAAAACT
AAAATTATTG TAAGCCGTCG CATAAACCCT TATTCTCCAA ATACACATTT GATAGCTTTC
TTCTCTGAAA ATGATATTTT TCCTTCCAAT CAAGTAAATG TGGTTGTAGA ACCAGATCCA
AGGAAGGCAA AAGCTGTGAC CGTTTTATTA AATTCAATAT TTTTCTTGGC TTATTTCTTT
AATCTTAAGG AAGAGACTAC TGGGAGATAT ATAGATATTC GTTTTTATGA TTTATACTCA
ATGAAACTGT ATCCTACTAC TAACACACAA ATTGATAATT TAGTAAAAGT ATTTAATAAA
TTTAAAGATG TAAATTTTCC TCCCTTAAGA GAGCAGCTTG ATGAGCATTT TACTGAAAGA
TATTCTGTAT TCTGGAGCTC AGAAAGAAAA AAAATTAAGC CTTTGATACC TGTTGATTCT
ATAAAGCCGC ATCCTGTACG ACTAAAATTC GATAAAGCCA TAATAAAAGC TTTAAACTTA
TCAATTTCGC ATGAAGAACT ATTGCAAGCT TATAATGCAA TAATAAACGA TATGATTATT
ACCCGAGGAT TAAAAAAAGA TTGA
|
|---|
| Protein sequence | MSEKRGKVTE RSLYPAIIDL LKKRGAEGVE EIKYESQPDI IADWLGARWI ISIKIGNYTK
SMFFKNAMIQ YARHIIDSGL KYGMIIFLPE SIRNISVEEK ALYNAIRNKK AYVILDTPET
QKEFLDTLPN IFEEVERILK EKIKSTYSLK TVITLLKEQI NDIMKETRIT EKEMTNIITS
DELFLGISAS KHKDIKVIKF ISTYIFLTQV LFARLYGVEH PAILSGFDIR NITKEGIREL
FRRITEINYR PIYKFDILDT IPEHYIKDTF TLIWNLKIEN IRFELPGRLF HELMPKEIKK
MLAAFYTRPI AAEILSCVTI NNAEEVVFDP ACGSGTILTA AYRRKRELWN KQEDPHKLFC
EEQIYGTDIM PFAVNLTTAN LASLNPKITI EKMNIARADS LKLELNVPIK NGLSKLERYG
IPISSNIKSK NMQGDEYDMV LDLMDVVLMN PPFTKIERGV KKYIKIERFK SRVGGEIGLW
GHFIALADMI LKPNGMFGGV IPINILRGRE SEKVRKIVFE EWLPLYVIKS TMNYGFSESS
EYRDILIIAK KTKSKPINHK VKFVLIKKDL NSLSFKDVKR ICDRIKTSSK LNDPLLEIRS
YSMEDIKKHF VNMMWFISGS SFEWKDNLLN IIRKSEMVLD YFPHSGNGYF MEGYRPVPKG
VSKFMFITRP INENRIDKAF LVLIKEDDKK IFAETKMMYE MSKLNEHSKS SIFDFDKDKF
LLTIRTPVGL NTMDITNKHD YIAISPYKDI EKIQRLSGFN SSLKNSYWNN IKKQMNNIKT
KIIVSRRINP YSPNTHLIAF FSENDIFPSN QVNVVVEPDP RKAKAVTVLL NSIFFLAYFF
NLKEETTGRY IDIRFYDLYS MKLYPTTNTQ IDNLVKVFNK FKDVNFPPLR EQLDEHFTER
YSVFWSSERK KIKPLIPVDS IKPHPVRLKF DKAIIKALNL SISHEELLQA YNAIINDMII
TRGLKKD
|
|---|
| |