Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4710 |
Symbol | |
ID | 4669044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5256988 |
End bp | 5257851 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639825906 |
Product | ubiquitin |
Protein accession | YP_973019 |
Protein GI | 120613341 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5272] Ubiquitin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCG GTTTTTCCCA CCCCTTCCCG CTTCCCGCCC GTCTTTCCTT GCGCCGCGCC TTCGCGCAGC TGGCGCTGCT CTGCCTGCTC GCCTCCGGGG CGCAGGGCGC CTGGGCCATG CAGGTCTTCG TGAAGATGCT CTCGGGCGAA ACCTTGACGC TGGATGTGGA GCCCAGCGAC TCCATCGAGA ACGTGAAGGC GAAGATCCAG GACCAGAAGG ACATTCCGCC CGAGCGGCAG CGCCTCATCT TCGCGGGCAA GCAGCTGGAG GACGGCCGCA CGCTGTCCGA CTACAACATC CAGAAGGACT CCACGCTGCA CCTCGTGCTG CGGCTGAGCC CGACCACGTT CTCGGCGGCG TCGGCCACCG GCACGGGCAC CATCACGGCC ACGCTGGCCG GCCCGGCCGT CGCGGGCGGC TGCCAGTTCG ACACCACGCA GACCGCCTTC GAGATGCCCT CCGGCGGCCC GGCCGGCGCA CAGTTTCCCC ACGGCGTGTT CCGCTTCGTC GCCACGAGCT GCACCGGCAG CGTGACGGTG ACGCTGCAAT ACCCCCAGGC CCTGCCCGAC GGCACCCGCC TCATCAAGTT CGGCCCCTCC GGCCCCGGCG CGGACCGCTA CACCTGGTTC GAGTGGACGG ACGCGCAGAT CGCGGACGAC ACGATCACCT TCACCATCAC CGACAACGGC GCGGGCGACA CCGACCCCAC CGTGGGCGTG ATCGCCGATC CGGCCGGCCC GGCACTGCTG GCCCCCGCGC CGGCACCCGC CCAGGCCACG CCGGTGCCCA CGCTCTCCCC CGCCGCGCTG GTGCTGCTGG CCTGCGCGGC GGGCGTGCTC GGCTGGCGAC AGCGTCGCCG CTGA
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Protein sequence | MTSGFSHPFP LPARLSLRRA FAQLALLCLL ASGAQGAWAM QVFVKMLSGE TLTLDVEPSD SIENVKAKIQ DQKDIPPERQ RLIFAGKQLE DGRTLSDYNI QKDSTLHLVL RLSPTTFSAA SATGTGTITA TLAGPAVAGG CQFDTTQTAF EMPSGGPAGA QFPHGVFRFV ATSCTGSVTV TLQYPQALPD GTRLIKFGPS GPGADRYTWF EWTDAQIADD TITFTITDNG AGDTDPTVGV IADPAGPALL APAPAPAQAT PVPTLSPAAL VLLACAAGVL GWRQRRR
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