| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4699 |
|---|
| Symbol | |
|---|
| ID | 4668273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5242345 |
|---|
| End bp | 5243376 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639825895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973008 |
|---|
| Protein GI | 120613330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTT TTCGCACTTT CCGGGCCAGT GGCTCCGGCC GCGGCAGGCC CCACGCGGCC
CGCCGCGCCC TTGCCCTGAT CGCTCCACTG GCACTGGCCT GCGCCATGGC CGGACCCCAG
TCCGCCCTTG CGCAGGATGC CTGGCCCGCG CGGCCGATCA CCCTGGTCGT GGGCTACCCG
CCCGGCGGCA GCACCGACCT GACGGCCCGC ACCCTGGGGC CGGAACTCTC CGCGCGCCTG
GGCGTGCCGG TCGTGATCGA GAACCTCGGC GGGGCCGGGG GCGCGATCGG CGCGCAGAAA
GTGGCCAGCA GTGCGCCCGA CGGCTACACG TTGCTGCTGG GCGCGAGCAA CGAGATCGCC
ATCAACCGGC TCGTCACGAA GAAGGTCAAG TACGACGTCA AGGATTTCAC CGCGCTGGCG
CTGGTGGCCT CGCAGCCCCT GGTGCTGGTG GCGTCCGCCG GCTCGGGCGT GAAGAACGCC
GCCGATTTCG TGCAGCGCGT GCGCTCGCAG CCGGGCAGGA CAAGCTACGG CAGTTCGGGC
GTGGGCACCT CGCTGCACCT GGCCGGCGAG ATGGTCAAGG AGCAGGGCCA GCTCTTCATG
ACGCACATTC CTTACCGCGG CGTGGCGCCG CTCACCAGCG ACCTGCTGGG CAACAACATC
GAGTTCGGCG TCTTCGTGCT CTCCAGCGCC CTGCCCCAGA TCCGCAGCGG CAAGATGGTG
GCGCTGGGCA CGACGGAAGC GCGCCGCTCG GCCATCACGC CCGACATTCC TGCGCTCTCC
GAGGTGCCGC AGTTCAAGAA CGTGGACATC AACGTGTGGT TCGCGCTCAT GGGCCCGGCC
CACCTGCCGC GCCCGGTGGC CGACAAGCTG CGCAAGGCCA CCCTGGAGGC GCTGCAATCG
GCGGACTTCC GCAAGAAGAT GGAAGCCAGC GGATCGGTCG TGGCTTCCCC GTCGGTCGAT
CCCGACGCAT TCGTCGCGGC CGAAGTGGCC AAGTACCGCA AGATTGTCCA ATTCGCGAAG
ATCGAGGAAT GA
|
|---|
| Protein sequence | MSSFRTFRAS GSGRGRPHAA RRALALIAPL ALACAMAGPQ SALAQDAWPA RPITLVVGYP
PGGSTDLTAR TLGPELSARL GVPVVIENLG GAGGAIGAQK VASSAPDGYT LLLGASNEIA
INRLVTKKVK YDVKDFTALA LVASQPLVLV ASAGSGVKNA ADFVQRVRSQ PGRTSYGSSG
VGTSLHLAGE MVKEQGQLFM THIPYRGVAP LTSDLLGNNI EFGVFVLSSA LPQIRSGKMV
ALGTTEARRS AITPDIPALS EVPQFKNVDI NVWFALMGPA HLPRPVADKL RKATLEALQS
ADFRKKMEAS GSVVASPSVD PDAFVAAEVA KYRKIVQFAK IEE
|
|---|
| |