Gene Aave_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4500 
Symbol 
ID4668586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4999019 
End bp4999723 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content73% 
IMG OID639825688 
Productputative phage repressor 
Protein accessionYP_972811 
Protein GI120613133 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.145923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA CCGCGTTGCA ACTGTACCGG CGCCAGCGCC TGGATGAGGC GATCAACCAC 
CTCACGGCGG GTAACGTGAC TGCGTTCGGG CGGCTGCTGG GGTACCGCGA CGGGGCTTTC
GTGCGGCAGA TGCTGTCGGG TTCGCGCGCG GTGTCGGACA AGACGGTGCG GGCGATCGAG
ACGCTGCGCG GCATGCGCGC GTGGTTCCAG ACGGACGGGG AGCCGCCCCT GCAGGCGGGG
GAGCGGGACC CGGCCTATCC GGACGCGGAG GCCGGCGCGG GCCGGGACGC CGTGCTGGTG
CTGGAGGTGC GGCGCCAGCA GGACCTGGGC GAGCGGCAGG GCGCCGAGCC CGCCTGCACG
GCGGACGGCG GCATGCGCAC CATCGCGCTC ACCCACGAGT GGCTGGAGCG CCGCAGCCTG
CGTGCGCGCG ACCTGATCGC GATCGCGGTG GGCGACGACA GCATGCAGCC GTCATTGCAT
CCCGGGGACG TGGTGGCGGT GGATACCCGC GATCCCTCGC CGGCCGACGG GCAGGTGTTC
GTGGTGGACT ACGAGGGCGC CTGCCTGGTG CGGCGGGTGG TGCGCGACAG CGGCGCATGG
TGGCTGGCCG CGGAGAACGC GCTGCGGTTT CCGCGCAAGC AATTGACCGC ACCCTCGGCG
CGGCTCGTCG GGCGGGTGGT GCACGTGCAC AGCGAGACGC TGTGA
 
Protein sequence
MDETALQLYR RQRLDEAINH LTAGNVTAFG RLLGYRDGAF VRQMLSGSRA VSDKTVRAIE 
TLRGMRAWFQ TDGEPPLQAG ERDPAYPDAE AGAGRDAVLV LEVRRQQDLG ERQGAEPACT
ADGGMRTIAL THEWLERRSL RARDLIAIAV GDDSMQPSLH PGDVVAVDTR DPSPADGQVF
VVDYEGACLV RRVVRDSGAW WLAAENALRF PRKQLTAPSA RLVGRVVHVH SETL