Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4500 |
Symbol | |
ID | 4668586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4999019 |
End bp | 4999723 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639825688 |
Product | putative phage repressor |
Protein accession | YP_972811 |
Protein GI | 120613133 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.145923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAA CCGCGTTGCA ACTGTACCGG CGCCAGCGCC TGGATGAGGC GATCAACCAC CTCACGGCGG GTAACGTGAC TGCGTTCGGG CGGCTGCTGG GGTACCGCGA CGGGGCTTTC GTGCGGCAGA TGCTGTCGGG TTCGCGCGCG GTGTCGGACA AGACGGTGCG GGCGATCGAG ACGCTGCGCG GCATGCGCGC GTGGTTCCAG ACGGACGGGG AGCCGCCCCT GCAGGCGGGG GAGCGGGACC CGGCCTATCC GGACGCGGAG GCCGGCGCGG GCCGGGACGC CGTGCTGGTG CTGGAGGTGC GGCGCCAGCA GGACCTGGGC GAGCGGCAGG GCGCCGAGCC CGCCTGCACG GCGGACGGCG GCATGCGCAC CATCGCGCTC ACCCACGAGT GGCTGGAGCG CCGCAGCCTG CGTGCGCGCG ACCTGATCGC GATCGCGGTG GGCGACGACA GCATGCAGCC GTCATTGCAT CCCGGGGACG TGGTGGCGGT GGATACCCGC GATCCCTCGC CGGCCGACGG GCAGGTGTTC GTGGTGGACT ACGAGGGCGC CTGCCTGGTG CGGCGGGTGG TGCGCGACAG CGGCGCATGG TGGCTGGCCG CGGAGAACGC GCTGCGGTTT CCGCGCAAGC AATTGACCGC ACCCTCGGCG CGGCTCGTCG GGCGGGTGGT GCACGTGCAC AGCGAGACGC TGTGA
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Protein sequence | MDETALQLYR RQRLDEAINH LTAGNVTAFG RLLGYRDGAF VRQMLSGSRA VSDKTVRAIE TLRGMRAWFQ TDGEPPLQAG ERDPAYPDAE AGAGRDAVLV LEVRRQQDLG ERQGAEPACT ADGGMRTIAL THEWLERRSL RARDLIAIAV GDDSMQPSLH PGDVVAVDTR DPSPADGQVF VVDYEGACLV RRVVRDSGAW WLAAENALRF PRKQLTAPSA RLVGRVVHVH SETL
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