Gene Aave_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3970 
Symbol 
ID4669929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4399631 
End bp4402009 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content71% 
IMG OID639825159 
Productmetal dependent phosphohydrolase 
Protein accessionYP_972287 
Protein GI120612609 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGGG AATTCCTGTT GAAAAACGAC ACGCAGGGGA GCAGCCACGC CCCCGCTCCT 
GCCGACGCCG CCGCGCCCCA CGCCCCGCCG GGCGCGCCAT CCACCACCCC CGCGTTCCAC
GCCCATTCCG TCGAAGGCCA GCCGGAAAGC CGCTGGCAGA CGCTGCCCGA GCACCTGCAC
GCCGTGGGCC GCATGGCCGG CGAATTCGCC GCCGTGTTCA ATGCGCAGGA GCTCGCCCAG
GTCATGGGCT GGCTGCACGA CCTGGGCAAG TACACCCTGC CCTTCCAGGC CCGGCTGCGC
GGCAGCCCCC TGCGCGTGGA CCATTCCACC TGGGGCGCGC GCATCGCCCA GCAGCGCCTG
GGCGTGATGG GGCAATTGAT GGCGTATGGC ATCGCGGGCC ACCACGCGGG CCTGGCCAAC
GGCCAGGGCG AAGGGGAGCG CACGGCACTG GCGGACCGGC TCACGGCCGC CGACCTGCCC
GCGCTGCACC CCGCCTGGGA AAAAGACATC CCCCTGCCCG CCCGGCTGGC GCTCCCCGCC
GGCCTCAAGC TCTACGGCCA GGACCGGCAG CAGGCCCTGG CGCGGCAGCC CTTCCAGATG
GCCTTCCTGG CGCGCATGCT GTTTTCCTGC CTGGTGGACG CGGACTTCAT CGACACCGAG
CGCTTCTACC TCCAGGCCAG GGGCGGACCG GACCACCGCT CCGCCGGCCC GGCCTGGCCG
GCCCTGCCGG CATTGCGCGC CCAGCTCGAC ACCCACCTGC GCACGCTCAC GGCGCAATGC
GATCCGGCCC GCGAGGTCAA CCGCCTGCGG GCGGACATCC TGCGCCAGGT CCGCGAGCGC
GCCGAGTGCA CCCCGGGTCT CTTCTCGCTC ACGGTGCCCA CGGGCGGCGG CAAGACCCTG
GCCTCGCTGG CCTTCGCGCT GGACCACGCC GTCCGCCACG GGCTGCGGCG CGTGATCTTC
GTCATTCCGT TCACCAGCAT CGTCGAGCAG AACGCCGCCG TGTTCCGCAA GGCCCTCGGC
CCGCTGGGCG ATACGGCCGT GCTGGAACAC CACAGCGCAT TCACCGAGCG CCAGCCGCCC
CATGACGACC CGGAGAAATA CCAATCCGCC GAGAAGCTGC GCCTGGCCAT GGAGAACTGG
GACGCGCCCA TCGTCGTCAC CACGGCCGTG CAGTTCTTCG AAAGCCTCTT CGCCGCGCGG
CCCTCGCAGT GCCGCAAGCT GCACCACATC GCCGGCAGCG TGGTGGTGCT GGACGAGGCG
CAGACCATGC CGCTCAAGCT GCTCAAGCCC TGCGTCGCCG CCATCGACGA ACTGGCGCGC
AACTACCGCA CCAGCATCGT GCTCTGCACC GCCACGCAGC CCGTGCTGGA GGCACCCGCG
TTCGACGGCG GGCTGACGGG CGTGCGCGAG CTGGCGCCCG AGCCCACGCG GCTCTTCCAG
CAACTGGAGC GGGTGCGCGT GCGCCACGTG GGCACGCTGG ACGACGCGGC CCTGGCCGGC
CACCTGCGGG CGCGCGAGCA GGTGCTGTGC ATCGTCAACA ACCGCCGCCA CGCGCGGGCC
GTGTACGAAG CCATGGCCGA CCTGCCCGGC GCGCGGCACC TGACCACGCT GATGTGCGCC
AGGCACCGCA GCGAGGTGCT GGACGAAGTG CGGCAGATGC TGGAGGCCGG CGAGCCCTGC
CGCGTCGTCA GCACCAGCCT GATCGAGGCG GACGTGGATG TGGACTTCCC CACGGTGCTG
CGCGCCGAGG CGGGCCTGGA TTCCATCGCC CAGGCGGCCG GCCGCTGCAA CCGCGAAGGC
GGCAGGCCCA TCGACGCCAG CGAGGTGCTG GTGTTCTCCC CCGCCAACGA GGACTGGGCG
CCGCCCCCCG AATTGAAGCA ATACGCCCAG GCGGCCCGCG AGGTGTTGCG CCAGTGCGCG
GACGACCCGC TGTCGCCCGG GGCCATCGCC CGCTATTTCG CGCTGTTGTA CTGGCAAAAG
GGCGGCGACC AGCTCGACGT GCCCGACCTC ATGGGCCTGC TCAAGACCCG CCGCCCGGAC
AGCCTGCCGA TGGAAACCCT GGCGACCCGG TTCCGCATGA TCGACAGCGT GCAGATGCCG
GTCATCGTGC CGTATGACGA CACGGCCCGG GAAACGCTGG AGCAGCTGCG GTTTGCCGAA
GGCAGCGTGG GGCTGGCGCG CAAGCTGCAG CCTTATGTGG TGCAGTTGCC GAGGCAGGGA
TTCGATGCGC TGTACCAGGC GGGGGCGATC GCGCCGGTGC GGCCGGATAG ATGGGGTGAG
CAGTTCATGC AACTGGTGCA TCCGGACATC TACAGCCAGC GCTCCGGACT GCATTGGGAC
GATCCCACCT TCATCCGCAG CGAACGCCTC CACTGGTGA
 
Protein sequence
MEREFLLKND TQGSSHAPAP ADAAAPHAPP GAPSTTPAFH AHSVEGQPES RWQTLPEHLH 
AVGRMAGEFA AVFNAQELAQ VMGWLHDLGK YTLPFQARLR GSPLRVDHST WGARIAQQRL
GVMGQLMAYG IAGHHAGLAN GQGEGERTAL ADRLTAADLP ALHPAWEKDI PLPARLALPA
GLKLYGQDRQ QALARQPFQM AFLARMLFSC LVDADFIDTE RFYLQARGGP DHRSAGPAWP
ALPALRAQLD THLRTLTAQC DPAREVNRLR ADILRQVRER AECTPGLFSL TVPTGGGKTL
ASLAFALDHA VRHGLRRVIF VIPFTSIVEQ NAAVFRKALG PLGDTAVLEH HSAFTERQPP
HDDPEKYQSA EKLRLAMENW DAPIVVTTAV QFFESLFAAR PSQCRKLHHI AGSVVVLDEA
QTMPLKLLKP CVAAIDELAR NYRTSIVLCT ATQPVLEAPA FDGGLTGVRE LAPEPTRLFQ
QLERVRVRHV GTLDDAALAG HLRAREQVLC IVNNRRHARA VYEAMADLPG ARHLTTLMCA
RHRSEVLDEV RQMLEAGEPC RVVSTSLIEA DVDVDFPTVL RAEAGLDSIA QAAGRCNREG
GRPIDASEVL VFSPANEDWA PPPELKQYAQ AAREVLRQCA DDPLSPGAIA RYFALLYWQK
GGDQLDVPDL MGLLKTRRPD SLPMETLATR FRMIDSVQMP VIVPYDDTAR ETLEQLRFAE
GSVGLARKLQ PYVVQLPRQG FDALYQAGAI APVRPDRWGE QFMQLVHPDI YSQRSGLHWD
DPTFIRSERL HW