Gene Aave_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3951 
Symbol 
ID4667614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4377242 
End bp4377907 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID639825139 
Productcytochrome c, class I 
Protein accessionYP_972268 
Protein GI120612590 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.2644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA AGTTGACCAC GATATTCGCC GTCGCTGTCG CTTGCGTGAC CGCGGTGGCG 
CATGCCCAGG ACGTCAAGGG AGACGTGAAG GCCGGGGAAG GCAAGATCGC CATGTGCATC
GGCTGCCACG GCATCCCGGG CTACCAGGCG AGCTTCCCCG AGGTGTACAA GGTGCCGATG
ATCTCGGGCC AGAACGCCGG CTACATCGCC TCGGCGCTGC AGGCCTACAA GAAGGGCGAC
CGCAGGCACC CGACCATGCG CGGCATCGCC GATTCCCTCT CCGACCAGGA CATCGCCGAC
GTGTCGGCCT ACTACGCCGG CCAGGCCCGC CAGGGTGGCG CGCCCGCCAA GGCCTCGCGC
GAGCCGAGCG CCCAGGTGGC GCAGCTGCTG CAGAAGGGCG CCTGCGTGTC CTGCCACGGG
GAGAACTTCT CCAAGCCCAT CGATCCGTCC TACCCGAAGA TCGCGGGCCA GCACCCCGAC
TACCTGTTCG CCGCGCTCAA GGCCTACAAG ACGGGCGGCC CCGCCGCGGC CGCCGTGGGC
CGCTCCAACG CGATCATGGC GGGCATCGCC AAGCAGTTCT CCAATGCCGA GCTCAAGGCC
CTGTCCGGAT ATCTGGGTTC GCTCGACGGT GAATTGCAGG TGGTGCGGCA ATCGGGCTTC
CGCTGA
 
Protein sequence
MNKKLTTIFA VAVACVTAVA HAQDVKGDVK AGEGKIAMCI GCHGIPGYQA SFPEVYKVPM 
ISGQNAGYIA SALQAYKKGD RRHPTMRGIA DSLSDQDIAD VSAYYAGQAR QGGAPAKASR
EPSAQVAQLL QKGACVSCHG ENFSKPIDPS YPKIAGQHPD YLFAALKAYK TGGPAAAAVG
RSNAIMAGIA KQFSNAELKA LSGYLGSLDG ELQVVRQSGF R