Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3608 |
Symbol | |
ID | 4666589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3982074 |
End bp | 3982598 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639824800 |
Product | putative lipoprotein |
Protein accession | YP_971933 |
Protein GI | 120612255 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.341689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGTGG CGTCCTTGCC CGCGGTGCCA CTGCGCCGCA GTCTGATCGG AGTCGTGGCA GGATTCGCGC TGGTGCTGGC CGGATGCGCC ACCCCGCCCC GCCCGCCCAG GACCGCGGCG CAGCCGGGCA CGCGTCAGTG GAACGGCCGC ATGGCCCTGC AGGTGGACGA CCCCGCGGTG GCGCCCGTCA GCGCCGGATT CGAGTTGAGC GGCGGACCGC AGCAGGGAGA GCTCGTGCTC CTGAACCCTC TGGGCAACGT GCTCGCCACC CTGGAATGGT CCCCTGCCGG CGCCGTGCTG CAAAAGGGCG GCGAGCGCCG CACTTCCCCA TCGCTCGACG CGCTGGTGCT CGAACTGACG GGCAGCGCGC TGCCCGTCGC GGCGCTCTTC GCCTGGCTCG ATGGCGATGC CATAGCGATA CCCGGCTGGA CGGTCGATAC CAGCAGGCTG GACGACGGCC GGCTGACCGC GCACCGCCAG AGCCCGCTGC CGGAGGCCAC GCTGCGCATC GTGCTGGACC GCTGA
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Protein sequence | MRVASLPAVP LRRSLIGVVA GFALVLAGCA TPPRPPRTAA QPGTRQWNGR MALQVDDPAV APVSAGFELS GGPQQGELVL LNPLGNVLAT LEWSPAGAVL QKGGERRTSP SLDALVLELT GSALPVAALF AWLDGDAIAI PGWTVDTSRL DDGRLTAHRQ SPLPEATLRI VLDR
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