Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3017 |
Symbol | |
ID | 4665491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3326629 |
End bp | 3327366 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639824219 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_971358 |
Protein GI | 120611680 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.234408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGCAGG AGGCCATGGA ACGCCTGCGG TCCTGGGTGG CCGGGGCGCA GCGCATCCTG GTGCTGACCG GCGCCGGGAT GAGCGCGGAA TCCGGGGTGC CCACCTTCCG CGATGCCCAT ACGGGCCACT GGGCGAAGTT CCGCCCGGAG GAGATGGCCA GCGAGGAAGG CTTCCGCGCC CGTCCCGGCA CGGTGTGGAC GTGGTACGAA CACCGCCGGG CCCAGCTGGC TGCGGTGCAG CCCAACGCCG GCCACCGTGC GCTGGCGGAT TTCGCGCGTC GCCACCCTGA GCGGCTGACG GTCGCGACGC AGAACGTGGA CGGCCTGCAC CAGATGGCCG GCAGCGAGGG GGTGCTCTGC CTGCACGGCG ACCTGCGCGC CAACCGCTGG CTGGATGCGC CGCTGCCCTG CTGCGATGCC GATGCTGCCG TGCCGGGCTG CCCGCCCACC TGCGCCACCT GCGGCAATCT CCTGCGGCCG GCCGTGGTCT GGTTCGGCGA GGAACTTCCG GCACGGTTGC TGGAGCAGGC GCAGGACGCT GCCCACGAGT GCGACCTGAT GCTGTCCGTG GGGACCGCCG GCGTCGTCTA TCCCGCCGCC GGCCTGGCGC ATACCGCGCA CCGGGCCGGC GCGCGCGTGG CCATCGTCAA TCCGGAACCC AGCGCGCTCG ACGGCGTGGC GGACCTGCTG GTGCCCGGCA CGGCGGCGCG GGTGCTGCCC TTCGTCCTGG CCGGTTAA
|
Protein sequence | MTQEAMERLR SWVAGAQRIL VLTGAGMSAE SGVPTFRDAH TGHWAKFRPE EMASEEGFRA RPGTVWTWYE HRRAQLAAVQ PNAGHRALAD FARRHPERLT VATQNVDGLH QMAGSEGVLC LHGDLRANRW LDAPLPCCDA DAAVPGCPPT CATCGNLLRP AVVWFGEELP ARLLEQAQDA AHECDLMLSV GTAGVVYPAA GLAHTAHRAG ARVAIVNPEP SALDGVADLL VPGTAARVLP FVLAG
|
| |