Gene Aave_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3017 
Symbol 
ID4665491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3326629 
End bp3327366 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content74% 
IMG OID639824219 
Productsilent information regulator protein Sir2 
Protein accessionYP_971358 
Protein GI120611680 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.234408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGG AGGCCATGGA ACGCCTGCGG TCCTGGGTGG CCGGGGCGCA GCGCATCCTG 
GTGCTGACCG GCGCCGGGAT GAGCGCGGAA TCCGGGGTGC CCACCTTCCG CGATGCCCAT
ACGGGCCACT GGGCGAAGTT CCGCCCGGAG GAGATGGCCA GCGAGGAAGG CTTCCGCGCC
CGTCCCGGCA CGGTGTGGAC GTGGTACGAA CACCGCCGGG CCCAGCTGGC TGCGGTGCAG
CCCAACGCCG GCCACCGTGC GCTGGCGGAT TTCGCGCGTC GCCACCCTGA GCGGCTGACG
GTCGCGACGC AGAACGTGGA CGGCCTGCAC CAGATGGCCG GCAGCGAGGG GGTGCTCTGC
CTGCACGGCG ACCTGCGCGC CAACCGCTGG CTGGATGCGC CGCTGCCCTG CTGCGATGCC
GATGCTGCCG TGCCGGGCTG CCCGCCCACC TGCGCCACCT GCGGCAATCT CCTGCGGCCG
GCCGTGGTCT GGTTCGGCGA GGAACTTCCG GCACGGTTGC TGGAGCAGGC GCAGGACGCT
GCCCACGAGT GCGACCTGAT GCTGTCCGTG GGGACCGCCG GCGTCGTCTA TCCCGCCGCC
GGCCTGGCGC ATACCGCGCA CCGGGCCGGC GCGCGCGTGG CCATCGTCAA TCCGGAACCC
AGCGCGCTCG ACGGCGTGGC GGACCTGCTG GTGCCCGGCA CGGCGGCGCG GGTGCTGCCC
TTCGTCCTGG CCGGTTAA
 
Protein sequence
MTQEAMERLR SWVAGAQRIL VLTGAGMSAE SGVPTFRDAH TGHWAKFRPE EMASEEGFRA 
RPGTVWTWYE HRRAQLAAVQ PNAGHRALAD FARRHPERLT VATQNVDGLH QMAGSEGVLC
LHGDLRANRW LDAPLPCCDA DAAVPGCPPT CATCGNLLRP AVVWFGEELP ARLLEQAQDA
AHECDLMLSV GTAGVVYPAA GLAHTAHRAG ARVAIVNPEP SALDGVADLL VPGTAARVLP
FVLAG