| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2740 |
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| Symbol | |
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| ID | 4666462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3010865 |
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| End bp | 3015673 |
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| Gene Length | 4809 bp |
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| Protein Length | 1602 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639823939 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_971082 |
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| Protein GI | 120611404 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGC ATATCTTCAG CGGGGGCAAC GGCGCGATCA CCCAGGTCGC CAACGGATGG
ACCTTCGACC CTGCCACCCC CGTCAAGCTC AAGACCAGCG GCAAGCCCGG CGTGGCATGG
CACGCCAACA ACAGCCGCGC CATCGACGTT CCGCTGGGCA CCATCCGCGA GCACGGCACG
CAGATGGCCA ACCGCTACGG CGCCATGGAC CAGGGCCAGC ACGATCCGGT CAGCGTCATC
GTGGGCCTGT TCACCAACGT GCGCGACAAG GTCAACGAAC ACGTGACCTA CGTGAAGACG
GTGGTCCACG AAGCGGGCGA GATGGTCGTG AACGGCGTGA CCACGCTGAC GAACTCCGTG
CTGAGCAAGC TGGCCCCGGA GATCCAGCAG ACGGTCAGGA ACGGTGCCGA CGTCCTGGGC
GGCATGAAGG TCGAGCACTT CGAAGGTGCG GCCCAGGAGC AGATCGACCA GATCATGGAA
ATGCTCAAGG ACCCGGCCAC CTACGGCGGG CTAGCGCTCT CTATGGCGGC CACGGCAGCG
CAGGGCGTGC CGGTGGTCGG GCAGGTGCTG GGCGGCGCGG TGGTGGCCGA CCGCATCGCG
ACCCTGGGCG AGTCAGGCAT CGCCGCGGCC CAGGAACTGC GGGACATCAT GCAGACCTGG
AGCTCACCGA TGACGGAGGC GCAACGGGAA GCGGCCCGCA AGCGTCTGGC GAAATGGATG
CTCGGCGCCG GTCTTGCCCT TCTTCTGGCC CTGGCCGGCA AGAAGTTCAA GATGCGCACC
AAAAGCAAGG GCAAGAACGA TACCCACGAA ACCACAGGAC ACAGCGATAC GAAGCAACCA
CACGGCAAAG GCTCATGCGA GCTTTGCCCA TCTAAGCATC CGGTGCTCCT CTCCAGCGGG
CAAAAGCTCA TGGACGAGAC GGACTTCACG CTACCTGGGC CTGGTCCATT GCTGTCCCTG
GCTTGGCGCC GTCGCTATCG CTCGGGTCTG GTGGAGGATG GTCCATTCGG GCGCGGCTGG
GGCCACGCGG TATTGCAGCA ACTGCGCTTA TCGGCAGAAG GGATGGTGTT CCAGGACGAG
GCTGGGCGTC ACGTGCCTCT ACCCCTTGTG GCTGAGGGCA TGGATTACTT CGATCCATAT
GAACAGTTCA CAGTGCGTCA CACGAGTTCC GATCTGTGGA TCGTGGAGCA CAAGGGCGGC
CTGCAGCAAC ACTTCTGCCG GCAGACCCCC GAACAGTGGT GCCTTCCGCT CGCGCGTCTG
CAGGACCGCG ACGGCAACGC CATCGCGTTG CACTGGGAGC CGCTGGAGCC CGGCGCCGGC
GGTGGCGATG CGGCAGAGCC GCTGACCTGG AGCGGCCGGC AGGAGCGCGA GCGCCGGGCG
CGCGAGCAAG GAGCAACCGC TCCACCCAGC CCCGATCCGT TTGCCACCGC CTTCAGACCG
CTGCGCCTCA CGGGGCTCAC GGACACGGCA GGCCGCCACC TACGACTGTC CTGGCAGCGC
TTCCCGGCCC CCGCTGCGCA CGATGCCCTG CAGGGCGAAC GCATCGCACG CGTCGAACTC
CTCGTGCCCG GCCATGCGCC CACCGAACTC GCGCGCTACG ACTACGATGC CCACGGCCAG
CTCGTCGCCA CCCACCACGG CGCCGCTCCC TACCGCCAAT ACGCCTGGCG CTCGGGTGTG
CTGGTGGGCT ACCGCAAGGC CAGCGGTCAC CGCTACTTCG CCCAGTACGA CAACGAAGGC
CCCGAGGGCC GCGTATTGCG CTCCTGGTGT GCCGACGCGC CCGTGCCCGG CCAGGATGAC
GACCGTTTCG CCTACTTTCC CGCCGAGCGC ATCACCCGCC ACATCGACGG CCTGGGCCGC
GTCACCGCCT ACCACTGGGA CGCGCGCTTC AACATCGTGG CCACGGTCAC CGCCGAGGGC
ACGCCCGAGG CCGTGCGCGT GGAAACCCCC TTCGACGCCA CCGGCACGCC ACGCGGAAGC
GTTGATGCCC TGGGCCGGCG CACCAGCCTG CGCACCGACG CGCGCGGCAA CGTCGTGCAG
GTCATTGATG CACTAGGGCA AAGCACACAA CTGCAATACG ACCAGCAGGA TCTGGTCACG
GTGCTGCGCG ATGCCATGGG CCATGCATGG CGGCGAGAGT ACGACGCTCG CGGCCATCTC
GTACGCTCCA TCGATCCCCT GGAACAGGCC ACCAGCTACG CTTACGACGC GCATGGCCGG
CCCGTGGAAA TCACCGATGC GCGTGGCGGC ACACGGCGCC TGGCCTGGGA CGAGGCTAGC
AACCTTGTCG CCACCACCGA CTGCTCGGGC CGCACCACAC GCTTCGCCTA CGGTCCCATG
GGACAGATCC TGGAGCGCAC CGATGCGCTC GGTCACACCA CACGCTACGC CTATGACGGC
ACAGGCAGGC TGGTGCGTGT GGAAGAGCCC GGCACGAACG GCGCGCCCGC CGTCCACCAA
TACGCCTGGA ACGGAGAAGG CCAATTGCTG GCCTATTCCG ACCCGCTCGG CCAGACCACC
CGCTACACCT ACGACGGCGC GGGCCGCCCA CTCACGCGCC AGGACGCGGC CGGCCGCATC
CTGGCCTACC ACTACGACGC AGCCGGCCGG CTCGTATCCC TCGTCAACGA GAACCGTGCG
CAGACCACCT TCCGCTACGA CCTGCGCGAC CAGCTTACCG ACGAGATCGG CTTCGACGGC
CGCTGGCAGC GCTACGTCTA TAACGCCGCG GGTGAACTCA CGCACGTGAT CGAAGCAGGA
GGCTGCGAGG CCGGCCCGGG CAAGGTCACG CGTTTCGAGC GCGACGCGCT GGGCCGGCTG
CTGGCCAAGC GGTCGCACGG GCACTGCACC GTGGAGGAAT CCAGCTATCG CTATGACGCG
CTGGGCCGCC TCACCCAGGC GAACAATGGC GCGGCGCACC TCGCCTTTGC CTATGACCCG
GTGGGGCAGT TGCTGTCGGA GACACAAACG CTGATCGGTC AAGGTGGGGC GGGCATGGGC
CGCGACCGCC CCGGCCATCC AGCGTCTGAC GACCTCGTGC GCACGCTCTC CCACGCCTAC
GATCCGCTGG GCAACCGCAT CCGCACGTGC CTGCCCGACG GGCGCACGCT GAACTGGCTG
TTCTACGGCT CCGGGCACCT GCACCAGATC AACATCGCTC CCGTCGACGA TCAAGACGCC
CACGAAGTCA TCACCGACAT CGAACGCGAC GCCCTGCACC GCGAGACAGA GCGTAGCCAG
GGCGCTGCCA CCAGCCACTA CGGCTGGGAC CCGGCGGGCC GCCTCGTGCG ACACCGCGCC
AGCCTGCGGG GCAGCGGCAA TGTGGCGACA GCGGCATCCG CTGCATCGAG CACGGTGCTG
GAACGCGCCT ACGCCTATGA CGCCACGGGC CAGCTCGTCG CGCGCGCCGA CACCTTGCGT
GGCCGGCAGG ACTTCCGCTA CGACCCCACC GGGCGCATCC TCGCCGCACT TCCCGCTCTA
GGCAGTGCGC TGGCCAGGGA GCTGTTCGCG TTCGATCCTG CTGGCAACCT GCTGGATGCC
AGCGAAGCGC AGATGCAGCG CCAGCAGGCA GGGCAGGCCA CGCCCCAGGG CCTCGGCGTG
GTCGGCGACA ACCGCCTGCG TTTCTACCAG GATCTGCACT TCGAGTACGA CATCCATGGC
AACGTGACGA AGCGCACGCG TGGCAACCGC AAGGCGGGGC ACCACGAAAC CATCGAACTG
CGCTGGAACG CCGACCACCA ACTGGTCGAA TCCACCACCA CCCGACACGG CGTGACGCAG
GCCACCCGCT ACGCCTACGA TGCGCTTGGC CGCCGCGTTG CGAAGAGCGA CCGTTTCGGC
ACTACGCACT ATCTATGGGA TGGTGACCTG ATGGTGCACA GCCAGCGCGG GAGGCGCGGA
TCGCTGTTCA TCTACGAGCC GGACAGCTTC GTGCCGCTGG CCACCGTCCA GGGCACGGGA
GAGGAACAAC ACACATACTG GTCCCACTGC GACCAGATCG GGGCGCCGCT GGAGCTGACT
GATGTCAATG GTCAAATTGC ATGGGCCGTC GATTACAAAG TGTGGGGCGA GGCTACGCTG
CGGGCTGTAC CGCGGTCCGA CACTGGTACA GATGGTGTGC CTGGACCACG GCGCCAAGGG
CATGGCCCTG AAGCGAAATC CCATGCTGCC GATAGCGAGG TAGTGTGCGC TCGAGAACCT
CAACGGGTCG AGCAACCGTT CCGCTTTCAG GGCCAGCAGT TCGATGAGGA GACAGGATTA
CATTACAACC GATCCCGATA CTACGACCCG GCAGTAGGAA GATTCATCAG CGAAGATCCC
ATAGGATTTT TGGGCGGAAT AAATACCTTC ATATACCCTC TCGATCCTTA CTCTTGGATC
GACCCTACAG GCCTTGCTGG CTTTAGAGCT TGTCCATGTG TTTGTAAGGA TATCCTCGCC
GGATTGAACG TTGGCCCCCA CAGCAAGATA AAAAAGATTG GTGGATTATA TGACTCTCAC
CATATATATC AAGACAAGGC GCTAGAGGGT CTGCCTGGTT ATACGCGTGG CGCAGCCGTT
GCAATCAGCT TGCAAGGGAG GAATGCGGAT AGGACCACAC GGGGTACGCC ACACTATAAA
GCGAATCGAG TGCAGGACCA GGCAGGTGGA GGAACGCTAG CAGCCGAGCG ACGTATCGGA
TACAAAAGCA TGCGTCGCGC AGGGCTTACT GAGGAGCAGG CAAAATGCGC TATGCTTGAA
GCGGACAATC ACTTGATTGG CCTCGGACTG AATCCGTCGA CAGTGACAAA CATACCAGGG
AACAGATAA
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| Protein sequence | MGTHIFSGGN GAITQVANGW TFDPATPVKL KTSGKPGVAW HANNSRAIDV PLGTIREHGT
QMANRYGAMD QGQHDPVSVI VGLFTNVRDK VNEHVTYVKT VVHEAGEMVV NGVTTLTNSV
LSKLAPEIQQ TVRNGADVLG GMKVEHFEGA AQEQIDQIME MLKDPATYGG LALSMAATAA
QGVPVVGQVL GGAVVADRIA TLGESGIAAA QELRDIMQTW SSPMTEAQRE AARKRLAKWM
LGAGLALLLA LAGKKFKMRT KSKGKNDTHE TTGHSDTKQP HGKGSCELCP SKHPVLLSSG
QKLMDETDFT LPGPGPLLSL AWRRRYRSGL VEDGPFGRGW GHAVLQQLRL SAEGMVFQDE
AGRHVPLPLV AEGMDYFDPY EQFTVRHTSS DLWIVEHKGG LQQHFCRQTP EQWCLPLARL
QDRDGNAIAL HWEPLEPGAG GGDAAEPLTW SGRQERERRA REQGATAPPS PDPFATAFRP
LRLTGLTDTA GRHLRLSWQR FPAPAAHDAL QGERIARVEL LVPGHAPTEL ARYDYDAHGQ
LVATHHGAAP YRQYAWRSGV LVGYRKASGH RYFAQYDNEG PEGRVLRSWC ADAPVPGQDD
DRFAYFPAER ITRHIDGLGR VTAYHWDARF NIVATVTAEG TPEAVRVETP FDATGTPRGS
VDALGRRTSL RTDARGNVVQ VIDALGQSTQ LQYDQQDLVT VLRDAMGHAW RREYDARGHL
VRSIDPLEQA TSYAYDAHGR PVEITDARGG TRRLAWDEAS NLVATTDCSG RTTRFAYGPM
GQILERTDAL GHTTRYAYDG TGRLVRVEEP GTNGAPAVHQ YAWNGEGQLL AYSDPLGQTT
RYTYDGAGRP LTRQDAAGRI LAYHYDAAGR LVSLVNENRA QTTFRYDLRD QLTDEIGFDG
RWQRYVYNAA GELTHVIEAG GCEAGPGKVT RFERDALGRL LAKRSHGHCT VEESSYRYDA
LGRLTQANNG AAHLAFAYDP VGQLLSETQT LIGQGGAGMG RDRPGHPASD DLVRTLSHAY
DPLGNRIRTC LPDGRTLNWL FYGSGHLHQI NIAPVDDQDA HEVITDIERD ALHRETERSQ
GAATSHYGWD PAGRLVRHRA SLRGSGNVAT AASAASSTVL ERAYAYDATG QLVARADTLR
GRQDFRYDPT GRILAALPAL GSALARELFA FDPAGNLLDA SEAQMQRQQA GQATPQGLGV
VGDNRLRFYQ DLHFEYDIHG NVTKRTRGNR KAGHHETIEL RWNADHQLVE STTTRHGVTQ
ATRYAYDALG RRVAKSDRFG TTHYLWDGDL MVHSQRGRRG SLFIYEPDSF VPLATVQGTG
EEQHTYWSHC DQIGAPLELT DVNGQIAWAV DYKVWGEATL RAVPRSDTGT DGVPGPRRQG
HGPEAKSHAA DSEVVCAREP QRVEQPFRFQ GQQFDEETGL HYNRSRYYDP AVGRFISEDP
IGFLGGINTF IYPLDPYSWI DPTGLAGFRA CPCVCKDILA GLNVGPHSKI KKIGGLYDSH
HIYQDKALEG LPGYTRGAAV AISLQGRNAD RTTRGTPHYK ANRVQDQAGG GTLAAERRIG
YKSMRRAGLT EEQAKCAMLE ADNHLIGLGL NPSTVTNIPG NR
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