| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2470 |
|---|
| Symbol | |
|---|
| ID | 4667539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2702424 |
|---|
| End bp | 2703206 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639823675 |
|---|
| Product | cyclohexadienyl dehydratase |
|---|
| Protein accession | YP_970819 |
|---|
| Protein GI | 120611141 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00435864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA CGTCCGCCGC CACCCTCATC GCCACCGCCG CCCTGGCGGC CGCCGGCTTC
CTGCAGGCCG CCCATGCCGG GCCCCGGCTC GACCGGATCA TGGACACCAA GGTGCTGCGC
GTCGGCACGC CCGGCGACTA CCGGCCCTTC GCCATCAAGG CCGATGGCGG CTATGCCGGC
CACGACATCG ATGTGGTCGA GGCCATGGCG AAGGAACTGG GCGTGAAGAT CGAATACGTG
CCCACGAGCT GGCCCAACCT GATGAAGGAC ATCCAGGCCG ACAGGTTCGA CGTGGCCGTG
GGCGGCATCA CGCGCAATGT CACGCGCATC CGCCAGATCG AAATGCTGCC GGGCTACGCG
CCGTTCGGCA AGGTGGCGCT GGTGCGGGCC TCCGACAAGG ACAGGTTCCG GGCCCTGGCC
GATCTGAACC GGCCGGGCGT GCGCGTCATC AAGAACCCGG GCGGCACCAA CGAAACCTTC
GTGCTGGAGA ACCTCAAGGC GGCCGATGTC AGCACGCACG ACAAGAACGC CGAGATCCCC
GCGCTCATCG CCGAGGGCAA GGGCGACGTG ATGATCACCG AGACGTACGA GGCCCTGCAC
TACGCCAAGG CCGACCCGCG CCTCCATGCG GCTTTCGTCG CCGCGCCGCT CACGCCGCAG
AACACCCTGG GATTCATGCT GCCCAAGGAC GACGCGGACT ATTCGCGCGT GATGGAGTTC
GTCTGGGGCC TGATGGAAGC CCGCGGCCAG CTCAAGCAGG CGGCCGACAA GTGGCTCAAG
TGA
|
|---|
| Protein sequence | MQRTSAATLI ATAALAAAGF LQAAHAGPRL DRIMDTKVLR VGTPGDYRPF AIKADGGYAG
HDIDVVEAMA KELGVKIEYV PTSWPNLMKD IQADRFDVAV GGITRNVTRI RQIEMLPGYA
PFGKVALVRA SDKDRFRALA DLNRPGVRVI KNPGGTNETF VLENLKAADV STHDKNAEIP
ALIAEGKGDV MITETYEALH YAKADPRLHA AFVAAPLTPQ NTLGFMLPKD DADYSRVMEF
VWGLMEARGQ LKQAADKWLK
|
|---|
| |