Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2319 |
Symbol | |
ID | 4667201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2546956 |
End bp | 2548056 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639823522 |
Product | TPR repeat-containing protein |
Protein accession | YP_970669 |
Protein GI | 120610991 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.147591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000323914 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCAAG CCCGCCGCCC ACTCCCCCAT CTCCTGCGAC TGCTGGTGCT GTCGGCCTTG CTGGGGGCGC CGCTGGCCCA CGCTGACGAC TATGCAGAGA TCACCCAGCT GCTCAAGTCC GGCAAGAGCC AGGAAGCGCT GGCCAAGGCG GACCAGCGCC TCCTGGCCAA TCCGCGCGAT CCCCAGCTGC GCTTCCTGCG CGGCGTGGCG CAGGCGGATT CGGGCAAGCA GGCGGATGCG GTGGCGACGT TCACCAAGCT CACCGAGGAT TACCCCGAGC TGCCCGAGCC CTACAACAAC CTGGCCGTGC TCTACGCGAA CCAGAACCAG CTCGACAAGG CGCGCACGGC CCTCGAGATG GCGATCCGCA CCAACCCGAG CTACGCCACG GCCCACGAGA ACCTGGGCGA CATCTACGCG AAGCTCGCCA GCCAGGCCTA CAACAAGGCC CTGCAGCTGG ACGCCTCCAA CGCCAACACG CTGCGGCCCA AGCTGAACCT GATCCGGGAC CTGTTCTCGG GCGACGCCGG CAAGTCCGCC GCGGCGAAAT CGGCCACCCC GGTGGCCACC GCGACCGCCC GCGCCCCCGC GTCGTCGCCA GCACCGGCGG CATCTCCGGC AGCGGCACCC ACGCGTGCCG CAGCACCGGC TCCCGCACCC TCCACGCCCC CCGCGCCGGC CCCTGCCAAC CTGCCCGCCC CATCGCCGGC ACCGGCGCCC GCTCCTGCAC CGGCGCCTGC CGCGGCGGCA TCCCCGGCCG CGGCCGAGAA GGAAGTCGCG GCCGCCGTGC GCGCCTGGGC CAGCGCCTGG GAAAGCCAGG ACATGCATGG CTACCTGGGT GCCTACGACC CGTCCTTCAC CCCTTCCGGC AAGCAGAGCC GCGCCGCCTG GGAAAAGGAG CGCCGCGACC GCATCGTGGG CCGCGCCAAG ATCAATGTCA GCATCAACGA CCTCCAGGTC ACGGTCAAGG ACAACAAGGC CCAGGCACGC TTCCGCCAGG GCTACAGTTC CGGCTCTTAC AGCGTGAACA GCCGCAAGAC CCTCGATCTG GTGCATACCG GCGGCCGCTG GCTGATCGTG CGCGAGACCA CCGGCGGCTG A
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Protein sequence | MTQARRPLPH LLRLLVLSAL LGAPLAHADD YAEITQLLKS GKSQEALAKA DQRLLANPRD PQLRFLRGVA QADSGKQADA VATFTKLTED YPELPEPYNN LAVLYANQNQ LDKARTALEM AIRTNPSYAT AHENLGDIYA KLASQAYNKA LQLDASNANT LRPKLNLIRD LFSGDAGKSA AAKSATPVAT ATARAPASSP APAASPAAAP TRAAAPAPAP STPPAPAPAN LPAPSPAPAP APAPAPAAAA SPAAAEKEVA AAVRAWASAW ESQDMHGYLG AYDPSFTPSG KQSRAAWEKE RRDRIVGRAK INVSINDLQV TVKDNKAQAR FRQGYSSGSY SVNSRKTLDL VHTGGRWLIV RETTGG
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