Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2047 |
Symbol | |
ID | 4667441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2234768 |
End bp | 2236486 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639823257 |
Product | Rhs element Vgr protein |
Protein accession | YP_970404 |
Protein GI | 120610726 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCC GCGTCACCAT CCGGACGCCC CTGGGAGAGC AGCTGCAATT CCGGCAGTTG CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAAGGC CGCGACATCG ATCCCAAGGC CTTGCTCGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA GGCGGCGGCA AGCGCTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGGCAGGAC CATCGGCTGT ACTCCTACCA CCTGCGCCTG CAGCCCTGGC TCTGGGTGGC CACGCGGCGG CAGGATTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTGCAGGA GGTGCTGGGC CGCTACGGTT ATCCGCTGCA GTTGAAGCTC ACGCGCGCCT ACCGCGCCTG GGACTACTGC GTGCAATACG GCGAGAGCGA CTTCGACTTC GTCTCCCGGT TGCTGGAGCA CGAGGGTGCG TATTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCGGA CGACATCGTG GCCGGCCACG AGCCTTTGCC GGGCGCGGCC GTGATCCCGT TCTACCCACC CGAGAAGTCG GCCGTCGCGG ACCGCGAGAA CATCCACGCC TGGACCCTGG GCGAGGAGAT CAAGTCCGGC CGCTACTACA ACGACGACTA CGACTTCCGC AAACCGAGGT CGGACCTCTC CAACATGCGC CAGCAGCCCC CGGGGCATGC GCACGATGCC TACGAGATCT ACGAATGGCC GGGCGGCTAC GTGCAGCATG GCGATGGTGA GCAGTACGCC CGGGTACGCC TGCAGGAAGG CCTGACGGGC CACAGCGTCG TCAAAGGCGA ATCGCGCCAC CGCAGCCTCG CGACGGGCTA CACCTTCACG CTGGAGAACT ACCCGCGGGG CGACCAGAAC CGGCAGTACC TCATCACCGG CGTCACCTAC CACCTGCACG AGAACCCGAG AAGCTCATCC TTCAACAGCG CCAAGCCGGG TGAATCGCTC AAGCACAACG AAGAGCAGGG GTCGTTCCAG AAGTTCAGCC TCACGGCCCA GCCCACGAGC CTGCCCTACA CCCCCGCGAG AACAACCCCG AAGCCACGCA CGACAGGCCC GCAGACCGCC GTCGTGGTCG GCCCGGCGGG CGAGGAAATC TGGACGGACG AGTACGGCCG CATCAAGGTG CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCAGTTGCTG GATGCGGGTG GCCACGAGCT GGGCGGGCTC GGGGTTCGGA GCGATCTCGA TCCCGCGCAT CGGGCACGAA GTGGTGGTCG ACTTCCTCAA CGGCGATCCT GACTATCCGC TGGTCGTGGG CTGCGTGTAC AACGCGGCGA ACATGCCGCC CTGGGCCTTG CCGGGCAATG CCACGCAGTC GGGCATCAAG ACCAAGTCCA GCAAGGGCGG GGCGTTCGGC GACGGGATGA AGAACGGCGC GGGCGATGCC AACGCGATCC GCTTCGAGGA CAAGAAGGGC GCAGAGCAAT TATGGCTGCA TGCGCAGAAG GACCAGCTCA TCGAGGTGGA AAACGACGAG GACCACTGGG TGGGCCAGGA CCGGCGCAAG ACCATCGACC GGGACGAGAC GAACACCATC CACCGGGACC GGACCGAGAC GGTCGATCGC AACGAGAAGA TCACGGTGCA TGGCTGGCGC ACCGAGTAA
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Protein sequence | MTRRVTIRTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG RDIDPKALLG KTATVEIETE GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG RYGYPLQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV AGHEPLPGAA VIPFYPPEKS AVADRENIHA WTLGEEIKSG RYYNDDYDFR KPRSDLSNMR QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSVVKGESRH RSLATGYTFT LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGESL KHNEEQGSFQ KFSLTAQPTS LPYTPARTTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSSCWMRV ATSWAGSGFG AISIPRIGHE VVVDFLNGDP DYPLVVGCVY NAANMPPWAL PGNATQSGIK TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQLWLHAQK DQLIEVENDE DHWVGQDRRK TIDRDETNTI HRDRTETVDR NEKITVHGWR TE
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