Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1803 |
Symbol | |
ID | 4668032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1957126 |
End bp | 1958505 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639823006 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_970162 |
Protein GI | 120610484 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.26222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCA TGCTTGCCGC GCGGTCGCGC ACCGCGGCCC GGCGCGTGCG CACGGCGCTG CTGAACGTGC GCGACCTGCT GCTGTCGGCC GGGCCGCTGG CCTTCGTGGC CGTGGGGCTG GTGGTGCTCG CCTACTGGTG GCTGCAGCCC AACCCGCCGC GCCGCGTGGT GCTGGCCACG GGGCCGGCGC AGAGCGCGTA TGCGGAGTTC GGCCAGCGCT ACCGGCAGGC GCTGGCGGCC GAGGGCATCG AGGTGGTGCT GAAGGAGAGC GAAGGCTCGT CGGCCAACCT GCAGTTGCTG CGCGAGGGCG CGGCGGACCT GGCCTTCGTG CAGGGTGGCA CGGGCGAGCT GCGGCCGGAG GATGCCGAGA CGCTCGAATC GCTGGGCAGC CTGTTCGTGG AGCCGGTGTG GATCTTCTAC CGCGAGGACG CGGCGCGGCG CGTGGCACCG GGCGGGCGGC TCACGCGCCT CGCGCAACTG CGTGGCCTGC GCGTGAACGT GGGCACGCCG GGCAGCGGCC TGCCGACGCT GGTGGACACG CTGCTGGAGG CCAACCACGT GGAGCCGGCC CGGGTGCGGC GCACGCAGCT CGGGCAGACG CCGGCCACGG TGGATTTTCT GGCGGGGCGG CTGGATGTGC TGGTGTTCGC CTCGGCGCCC GAGTCGCTGA TGGTGCAGAT GCTGCTGCAG ACGCCGGGCG TGCGGCTGAT GGACTTCCCG CAGAACGAGG CCTATGGCCG GCGCTTTCCG TTCCTCACGC CGGTCACGCT GCCGCGCGGC GTGGTGGACC TGGCGGGCGA CGTGCCGCCG TCGGACGTGC GGCTGGTGGC CTCGACCACC TCGCTGCTGG CGCGCGACGG CACGCACCCG GCGCTGCTGC AGCTCTTTGC GCAGAGCGCG CAGACGCTGC ACGGCGGCGC GGGATGGTTC AACCGCGCGC GGGATTTCCC GAACACGCGG CACATCGAGC TGCCGATCGC GGCCGAGGGC GAGCGCGCCA TCAACGGCTC GCCGCCGCTG CTGCAGCGCT ACCTGCCGTT CTGGATCGCC AACCTCGTCG AGCGCATGTG GCTGGTGCTG GGCGTGCTGC TGGCCGCGAT GCTGCCGCTG TCGCGCGTGG TGCCGCCGCT CTACCAGTTC CGCGTGCGCT CGCGCGTGTT CCGCTGGTAC GGCCGCCTGC GCGAGATCGA GGACCAGTTC GAGGTCGGCG GCCTGCCGCC GCAGGAGTTG CTGGCGCAGT TGGGCCAGCT GGAAGCGCAG GTGGAGAAAG TGAGCGTGCC GCTGTCGTAC GCGGACGAGC TCTACGCGCT GCGGCACCAC GTCCAGATCG TGCGGCAGAA GGTGGCCGCC GGCGTGGAGG CCCCGTCCGC CCGTCCTTAG
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Protein sequence | MNVMLAARSR TAARRVRTAL LNVRDLLLSA GPLAFVAVGL VVLAYWWLQP NPPRRVVLAT GPAQSAYAEF GQRYRQALAA EGIEVVLKES EGSSANLQLL REGAADLAFV QGGTGELRPE DAETLESLGS LFVEPVWIFY REDAARRVAP GGRLTRLAQL RGLRVNVGTP GSGLPTLVDT LLEANHVEPA RVRRTQLGQT PATVDFLAGR LDVLVFASAP ESLMVQMLLQ TPGVRLMDFP QNEAYGRRFP FLTPVTLPRG VVDLAGDVPP SDVRLVASTT SLLARDGTHP ALLQLFAQSA QTLHGGAGWF NRARDFPNTR HIELPIAAEG ERAINGSPPL LQRYLPFWIA NLVERMWLVL GVLLAAMLPL SRVVPPLYQF RVRSRVFRWY GRLREIEDQF EVGGLPPQEL LAQLGQLEAQ VEKVSVPLSY ADELYALRHH VQIVRQKVAA GVEAPSARP
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