Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1001 |
Symbol | |
ID | 4666872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1098205 |
End bp | 1100049 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639822201 |
Product | Ig domain-containing protein |
Protein accession | YP_969373 |
Protein GI | 120609695 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.313709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAT TGATGAGAGC CATCGCGTTG ACGCTGGCTG CCACGCTTGC AGCGTGTGGA GGAGGTGGCG GGAGCGGCGG GAGCAGCGGC GGCGGAAGCG GCGGCGGCAC CACGACGCCG AACGTGGCAT CCATCGAGGT CCTGACCTCG GCGACCACGC TGGCATCCGC CGATGCCACG GGCGTGACGG TCACGGCCGT GCTGAAGGAC GCAGCCAACA ACGCCATCGC GTCCAAGCCG GTGACCTTCA GTGCGAGCAG CGGCACGCTG GCCAGCGCGG CGGCCTCCAC CGGTGCGGAC GGCCGCGCCA CGGCCACCCT CACCGCCGGC ACGGACCGTT CCAACCGCGA CATCGTGGTG ACGGTGGCAT CGGGCTCCGT CACGCAGAAG GCGACCATTC CGGTCTCGGG CACCACGCTG ACGGCATCGG GTGCCACGTC CATGCTGACG GGCGCAACGA CCAACTTCGC CGTGTCCTTG CGCGACAGCG GCGGGGCCGC TCTTCCCGGC GTTGCGGTGA CTGCTTCATC GTCGCTGGGC AATGCGGTTA CTGCCAGCAG CGCCACGACG GACACCAATG GTTCGGTGAC GCTGGCCTAT GCAGCCACCC GCAGCGGCAC GGACACGCTG ACCATCCAGG GCGCTGGGGC GTCGCAGGCG CTCACGATCA ATGTCAGCAG CGTGAATTTC GCCTTCTCGG CCCCCGCTGC CAACACGGAG GTCGAGGTCA ACAGCACCCG CACGGTGACA GTGCGCTACC TGTCGGGCAA TGCCGGAGTG GCGGGCAAGG TCATTTCGTT CGGCACGACC CGCGGGACCG TGACGCCCAC GCAGGCGGTG ACCGACGCGA ATGGTTCGGC CACGGTGCAG GTGACTTCCC CGTCGGTGGG CATCGCCACG GTGAGCGCCC GCGTGGATGA CAACGCCATC ACGACCCTGC CGCTGAATTT CGTGGCTTCC ACGCCCGCGA CCCTGGTCCT GCAGACTTCG TCGGCAGCCC TGGCACCCAA CCCGGCCGGC AGCAGCACCA GCCAGGTGCA ACTGCGCGCC ACCGTGCGCG ACGCTGCCGG CAATGCCGTC AAGGGCAAGA CCGTGTTCTT CACCGTGGTG CAGGACCTGA GCGGCGGCGC CATCAAGACG GGCACGGCAG TCACCGATGC CAACGGACTG GCGACGGATG TGTTCGTGGC CGGCGCCACC TCGACTGCTG CCAATGGCGT GCAGATCCGC GCCAGCGTGG CCAACACCAA CATCAGTGCC GTGTCGTCCC TGACGGTGAG CAACCAGGCG CTCTTCATCT CCATCGCGGC CAACAACCAG ATCGAGAAGC TGACGACCAC GTACCGCAAT ACGTTCTCCG TGCAGGTCAC GGATGCCACC GGCGCGCCGG TGGCCAACCA GAATGTGGCG CTGTCGTACT GGGCTCCGCT GTATGGCAAG GGTACTCTGC TCTTCGACAA GACCAACAAT GTCTGGACCT ACAGGGACAA TCCCCCGGCC TTCTGCTTCA ATGAAGATGC CAATCGCAAC GGCATTCTCG ATCCGGGCGA GGACCGGGAC GGCAACGGCC GCCTGAGCCC GGGGCTGCCG GCTGCCATTG CGCCGGCTTC CGTGACCACG GATGCCACCG GCAGCGCAAC CTTCACGCTG ACCTTTGGGC AGCAATATGC CAATTGGCTG CAGATCGAGC TGGCTGCCAG GGCCATCGTT GCGGGCACGG AATCCAGCAC GTTCTTCAGC TTCTTCACGG GGGCACCGTC TTCCGACATG ACGAACGCGC AGGTGCCTCC CGCCTCGCAG GTCAGTCCTT TCGGCAGCAT CAACAATTGC GCGGACCCCA ACTGA
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Protein sequence | MKALMRAIAL TLAATLAACG GGGGSGGSSG GGSGGGTTTP NVASIEVLTS ATTLASADAT GVTVTAVLKD AANNAIASKP VTFSASSGTL ASAAASTGAD GRATATLTAG TDRSNRDIVV TVASGSVTQK ATIPVSGTTL TASGATSMLT GATTNFAVSL RDSGGAALPG VAVTASSSLG NAVTASSATT DTNGSVTLAY AATRSGTDTL TIQGAGASQA LTINVSSVNF AFSAPAANTE VEVNSTRTVT VRYLSGNAGV AGKVISFGTT RGTVTPTQAV TDANGSATVQ VTSPSVGIAT VSARVDDNAI TTLPLNFVAS TPATLVLQTS SAALAPNPAG SSTSQVQLRA TVRDAAGNAV KGKTVFFTVV QDLSGGAIKT GTAVTDANGL ATDVFVAGAT STAANGVQIR ASVANTNISA VSSLTVSNQA LFISIAANNQ IEKLTTTYRN TFSVQVTDAT GAPVANQNVA LSYWAPLYGK GTLLFDKTNN VWTYRDNPPA FCFNEDANRN GILDPGEDRD GNGRLSPGLP AAIAPASVTT DATGSATFTL TFGQQYANWL QIELAARAIV AGTESSTFFS FFTGAPSSDM TNAQVPPASQ VSPFGSINNC ADPN
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