Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0540 |
Symbol | |
ID | 4669374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 585884 |
End bp | 588157 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639821745 |
Product | DEAD-like helicase |
Protein accession | YP_968919 |
Protein GI | 120609241 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCG ACCTCGAACC CGCCGCCGAT GCAGAGCCCG TACAAGGCGA ACTGCTCGAT GCGGATGCCT CACCCCTGTC CCTGAGCCTC ACCGAGTTCG TTGCCGAATT CGGCGACGAA CTGCTCGAAT CACTGAACCG CGCCAACCCG CCGGTCTATG CCGGCCAGCC GAGGGCGCAT CGCGAGCGCG TCATCGCGGG CCTCAAGCGC CGCCTCTTCC CCGCCCAGGC CGAAGTCGTC CACGCGGCCG CCGAGCTGTT GATCGACCGC GGCGAGCGCG CCGCGTTCGT CAACGGCGAG ATGGGCTGCG GCAAGACCAC GGTGGGTATC GCCACCGCGG CCGTGCTGCA CGCGGAGGGC TATCGCCGAA CGCTGGTCCT ATCGCCTCCG CACTTGGTCT ACAAGTGGCG CCGCGAAATC CTCGAAACCG TTGCGGGTGC CAAGGTCTGG GTGCTCAACG GCCCGGATAC GCTGGTCAAG CTCATCAAGC TGCGCGAGCA ACTGGGCGTG CAGCCCGGCG GCCAGGAGTT CTTCGTCCTG GGCCGGGTGA GGATGCGGAT GGGCTTCCAC TGGAAGCCAA CCTTCGTTGC CCGGCGTACG CGCCACGGCC ACGTAGCCGC CTGTCCGGAC TGCGGCACGG TCGTCACCGA CCTCGACGGC GAACCTGTCA GCCCGGTCGC GCTGGACGCG GAGGAGTACC GCAGGAAGTG CGGCCACTGC GCCACCCCGC TGTGGACTTT GATGCGTCCT CGCACCCTCT CAGGCAGCGA CCAGTCCTCG GCCGTGTTGA AGGCGCTCAA GCGCATTCCC ACCATCGGCG AGGTCACCGC CCAGAAGCTC ATGCGCAAGT TCGGCGATGG CTTCCTGGCC TCGATGCTGG GCGACAACAT CCACGAGTTC ATCAACCTCA TGGATGGCGA CGGGGAGTTG GTGTTCTCCG ACCGCCAGGC CGCGCGCATG GAACGGGCGA TGGCCAACAT GGAGTTCGGC TTCGGCGAGG GCGGCTACCA GCCCAGCGAA TTCGTCAAAC GCTACCTGCC GAACGGCACG TTCGATCTGC TCATCGCCGA CGAGGCGCAC GAGTACAAGA ACGGAGGCAG CGCCCAGGGC CAGGCCATGG GCGTGCTCGC ATCGAAGTGC CGCAAGTCGC TGGCGCTCAC CGGCACGCTG ATGGGCGGGT ACGGCGATGA CCTGTTCTAC CTGCTGTTCC GCGCCCTGCC CGGGCGGATG ATCGAAGACG GCTACCGCCC CTCCAAGAGC GGCAGCATGA CCTCGGCCGC CATGGCTTTC ATGCGCGATC ACGGCGTTTT GCGAGATATT TATTCCGAGA GCGCAGGCAC CGCGCACAAG ACCGCCAAGG GCAACAAGGT CAGCGTGCGG ACGGTCAAGG CACCTGGCTT CGGCCCGAAG GGCGTGCTGC GCTGCGTCGT GCCGTTCACC ATCTTTCTCA AGCTGCGGGA TATCGGCAGC GATGCGCTCC CGCCGTACGA CGAAGAGCTC CGAGAGGTGC CGATGGCACC GGCCCAGGCC GCCGCCTACG CGGCGCTGTC CGTGCGGCTG ACCACCGAGT TGCGGCAGGC ACTGGCCCGC CGCGACACCA CCCTGCTGGG TGTCGTCCTC AACGCGCTGC TCGCCTGGCC GGACACGTGC TTTCGCGCGG AGAACGTTGT GCATCCCCGC ACGCGCGCCA CCCTCGCGTT CGTTCCCTCG CAGTTCCACG ACATGGAGGT CATGCCGAAA GAGCGGGAGC TGATCGAGAT CTGCCGCCAG GAGAAGGCGC TGGGCCGGAA GACGCTGGTC TATACGACGT ACACGGGCAA GCGCGACACG ACTTCGCGGC TGAAGCGAAT ACTCGAACTG GAAGGCTTCA AAGTCGCGGT GCTGCGAGCC ACCGTGGATG CCAGCCGCCG CGAGGACTGG ATCGCCGAGC AGGTGGACCG GGGCATCGAT GTCCTCATCA CCAATCCGGA ACTGGTGAAG ACCGGTCTGG ATCTGCTGGA CTTTCCGACG ATCGTGTTCA TGCAGTCCGG CTACAACGTG TACTCGCTGC AGCAGGCCGC CCGCCGATCC TGGCGCATCG GCCAGAAGCA GGACATCCGC GTGATCTTCC TCGGCTACGC GGCGTCATCG CAGATGGCGT GCCTGAAGTT GATGGCGCAG AAGATCATGG TGGCGCAGAG CACGTCGGGA GACATCCCGG AAAGCGGGCT CGACGTGCTG AACCAGGACG GTGATTCGGT GGAAGTGGCG CTCGCACGCC AGTTGGTGGC TTGA
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Protein sequence | MSLDLEPAAD AEPVQGELLD ADASPLSLSL TEFVAEFGDE LLESLNRANP PVYAGQPRAH RERVIAGLKR RLFPAQAEVV HAAAELLIDR GERAAFVNGE MGCGKTTVGI ATAAVLHAEG YRRTLVLSPP HLVYKWRREI LETVAGAKVW VLNGPDTLVK LIKLREQLGV QPGGQEFFVL GRVRMRMGFH WKPTFVARRT RHGHVAACPD CGTVVTDLDG EPVSPVALDA EEYRRKCGHC ATPLWTLMRP RTLSGSDQSS AVLKALKRIP TIGEVTAQKL MRKFGDGFLA SMLGDNIHEF INLMDGDGEL VFSDRQAARM ERAMANMEFG FGEGGYQPSE FVKRYLPNGT FDLLIADEAH EYKNGGSAQG QAMGVLASKC RKSLALTGTL MGGYGDDLFY LLFRALPGRM IEDGYRPSKS GSMTSAAMAF MRDHGVLRDI YSESAGTAHK TAKGNKVSVR TVKAPGFGPK GVLRCVVPFT IFLKLRDIGS DALPPYDEEL REVPMAPAQA AAYAALSVRL TTELRQALAR RDTTLLGVVL NALLAWPDTC FRAENVVHPR TRATLAFVPS QFHDMEVMPK ERELIEICRQ EKALGRKTLV YTTYTGKRDT TSRLKRILEL EGFKVAVLRA TVDASRREDW IAEQVDRGID VLITNPELVK TGLDLLDFPT IVFMQSGYNV YSLQQAARRS WRIGQKQDIR VIFLGYAASS QMACLKLMAQ KIMVAQSTSG DIPESGLDVL NQDGDSVEVA LARQLVA
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