Gene Aave_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0318 
Symbol 
ID4665946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp351096 
End bp351779 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content73% 
IMG OID639821524 
Producttwo component transcriptional regulator 
Protein accessionYP_968699 
Protein GI120609021 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC GCCTGCTGCT CGTGGAAGAC GATCCGGCCA TCGCGCGCAC CGTGGCCTAC 
GCCCTGGAAC GCGATGGCCT GGCGGTGAGC CACAGCCTGC TGCTGGGCGA TGCCCGCGGC
CTGCTGCGCG CCCACCGCTT CGACCTGCTG GTGCTGGACG TGGGCCTGCC CGACGGCAGC
GGCCTGGATC TGCTGCGCGA ACTGCGCCAG CAGGGCAGCG CCCTGCCCGT GCTCATGCTC
AGCGCCCACG GAGAGGAGAT CGACCGCGTG CTGGGCCTGG AACTCGGTGC CGACGACTAC
CTGCCCAAGC CCTTCAGCCC GCGCGAACTG GCCGCCCGGG CCAAGGCCCT GCTGCGCCGT
GCCGCCGCGC CTGCGGCGGC GCCCGCCTCC CCGGTCACCG GCCCCTTCCA TGACGACGCC
GCCGGCCAGC GCATGCACCT GCACGGAAGA CCGCTGGCGC TCACGCGCCG GGAATACCGC
CTGCTGTCCC AGCTGCTCGC GGGCGCGGGC CGCATCCACA CGCGCGAGGC CCTGCTGGCC
GGAGCCTGGG GCGGCGACAG CGAGAGCACC GACCGCACCG TGGACACGCA CATCAAGACC
CTGCGCGCCA AGCTGCGCGA GGCCGACCCG TCGCGCGAGT ACATCCATAC CCACCGGGGC
ATGGGCTATT CACTAGAGGT ATGA
 
Protein sequence
MAARLLLVED DPAIARTVAY ALERDGLAVS HSLLLGDARG LLRAHRFDLL VLDVGLPDGS 
GLDLLRELRQ QGSALPVLML SAHGEEIDRV LGLELGADDY LPKPFSPREL AARAKALLRR
AAAPAAAPAS PVTGPFHDDA AGQRMHLHGR PLALTRREYR LLSQLLAGAG RIHTREALLA
GAWGGDSEST DRTVDTHIKT LRAKLREADP SREYIHTHRG MGYSLEV